Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00272 ATGGAAGCTGATGACAAGATCCAGTCGCCTCATTCGCCGGCCAGTGAATCCCCGGGTTCGCCGCCGGCCAACGGTCGGATCACGGTTACGGTGGCTGCGCCGGCGCCGTCGCCGCCCCACAACAGCTTGGCACTAGCGCTTCCGGCCCAGCACCAGCAGTCAAAGGGTAATGGTGGTGGTGGAGGAGGGAGGGAGGATTGCTGGAGTGAAGGAGCGACGGCGGTGTTGATCGACGCGTGGGGGGAGAGGTATTTGGAACTGAGCCGGGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTTGCGGATATTGTGAGTAGCAGGGAGGACTACAGGAAGACCCCCAAGACTGATATTCAGTGCAAGAATCGGATCGACACTGTCAAGAAGAAGTACAAGTTGGAGAAGTCCAAGATCGCGGCCGGTAGTGGCCCTAGTAAATGGCCGTTCTACGAGAGGTTGGACCAGTTGATCGGTCCGACTGCGAAAATTCCTGGGTCTTCCGGCGGCGCGGCCGCCGGAGGTAACACGGCGAACAGTCTGTCAAATCAGAAAATGCCTCTGGGAATTCCTGTAGGAGTTCGTGCTGCGAATCAGAATCCGTATCAGGCTCATCAACGACTGCAGAAGCCTCAGCTTCGGATGAAGACGCCAAGCCAGAAGATACAGTTGCGGAAGCGTGCTCCGGTTAACTCAGATTCGTCTCCGTCTGAGAGAGAATCGTCGCCGGTTTCGAGTGATAGTTTTCCACCGGGTACGTATGAGACGAAGAGACCCAGAATGGCAAGAGTGGTCAATTCTGATGCTGCGCCTGTAGAAACAAAGAGTAAAGGTTGGGGAAGTGCTATCAGGGAATTGACGCAGGCCATACTGAAATTCGGGGAAGCATATGAAAAGGCAGAGAGCTCGAAGATTCAGCAGGTTGTGGAAATGGAGAAGCAGAGGATGAAATTTACCAAGGAGATGGAATTGCAGAGAATGCAGTTCTTCATGAAGACCCAGCTGGAATTATCGCAGCTGAAGCGTGGTAAGAGAGGAGGAGGAGGAGGAGGAGGAAACGCCAGCAACATCAACAATAACATTAACAATCATAGTGACAGTGATAACCTGCTTACAGTTAATGGAAACACTAAGAAACGAGCATCAGCATTGGCAAAGTCATTTACAACTCATTCAAAGGTTGCAGATGAGCATAGCAGGTTGCGCAAGCAGTGCAGTTATTCAAGCCAGAGATTGTGA 1236 0.5243 MEADDKIQSPHSPASESPGSPPANGRITVTVAAPAPSPPHNSLALALPAQHQQSKGNGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSSREDYRKTPKTDIQCKNRIDTVKKKYKLEKSKIAAGSGPSKWPFYERLDQLIGPTAKIPGSSGGAAAGGNTANSLSNQKMPLGIPVGVRAANQNPYQAHQRLQKPQLRMKTPSQKIQLRKRAPVNSDSSPSERESSPVSSDSFPPGTYETKRPRMARVVNSDAAPVETKSKGWGSAIRELTQAILKFGEAYEKAESSKIQQVVEMEKQRMKFTKEMELQRMQFFMKTQLELSQLKRGKRGGGGGGGNASNINNNINNHSDSDNLLTVNGNTKKRASALAKSFTTHSKVADEHSRLRKQCSYSSQRL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00272 411 MobiDBLite consensus disorder prediction 1 68 - -
Accr6g00272 411 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 40 343 IPR044823 -
Accr6g00272 411 MobiDBLite consensus disorder prediction 351 372 - -
Accr6g00272 411 MobiDBLite consensus disorder prediction 198 251 - -
Accr6g00272 411 MobiDBLite consensus disorder prediction 160 268 - -
Accr6g00272 411 MobiDBLite consensus disorder prediction 10 24 - -
Accr6g00272 411 Pfam Myb/SANT-like DNA-binding domain 65 156 IPR044822 -
Accr6g00272 411 MobiDBLite consensus disorder prediction 171 185 - -
Accr6g00272 411 Gene3D - 68 133 - -
Accr6g00272 411 MobiDBLite consensus disorder prediction 340 372 - -
Accr6g00272 411 FunFam trihelix transcription factor ASIL2 68 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00272 Accr-Chr6 4180466 4182889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00272 1 346 Trihelix Transcription Factor Family AT3G14180 46.948 1.41e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr6g00272 Myb_DNA-bind_4 7.2e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00272 - - qsa:O6P43_027506 431.795