Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00269 ATGGCTGATAGTAATGAAGGAGGAGGTAATGACTTGTACGGGGTTCTGGGAGTGAACAAGGACTGCTCCGAATCAGAGCTCAGACATGCCTACAAGAAGCTTGCTCTGAAATGGCACCCAGATCGTTGTTTGGCGTCTGGGAATTCAAAGACCATAGAAGAAGCTAAGAACAAGTTCCAGGCAATCCACCATGCCTATTCTGTGTTGTCAGACGTCAACAAAAGGTATTTGTACGATGTGGGAGTCTACAAGAGTGATGAAGATGACGACCAAAATGACATGGGTGAGTTCTTGAACGAAATGGTGTCAATGATGAGCCAAACAAAGCCTAATGAAAATGGTGGGGAGGAGAGCATGGAGGAGTTGCAGCAGCTATTTGAACAAATGTTTGAAGCAGACAACGTAGGAGAAGGGAACATATGCTATGCTTCTGCTTCTTCTTCTTCATCTTCATCTTCATCATCATCTACGTACGTGAGTTTCAAAACAACTTCCGACGACTTTGATATCAACAACGTTATTGGCAACTCCCATGAATCTTTTCATCACTTGAATCATGCCTCCAACAACTTCTGTTTAGGGACAAATAATGGAGCAGCTTCAAGATATGAAGAAGGGAAAAGGAGAACGAGGAGGAGGTAG 642 0.4361 MADSNEGGGNDLYGVLGVNKDCSESELRHAYKKLALKWHPDRCLASGNSKTIEEAKNKFQAIHHAYSVLSDVNKRYLYDVGVYKSDEDDDQNDMGEFLNEMVSMMSQTKPNENGGEESMEELQQLFEQMFEADNVGEGNICYASASSSSSSSSSSSTYVSFKTTSDDFDINNVIGNSHESFHHLNHASNNFCLGTNNGAASRYEEGKRRTRRR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00269 213 Pfam DnaJ domain 11 79 IPR001623 -
Accr6g00269 213 SUPERFAMILY Chaperone J-domain 9 81 IPR036869 -
Accr6g00269 213 PANTHER PUTATIVE, EXPRESSED-RELATED 4 171 - -
Accr6g00269 213 CDD DnaJ 11 71 IPR001623 -
Accr6g00269 213 Gene3D DnaJ domain 9 141 IPR036869 -
Accr6g00269 213 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Accr6g00269 213 PRINTS DnaJ domain signature 54 74 IPR001623 -
Accr6g00269 213 PRINTS DnaJ domain signature 13 31 IPR001623 -
Accr6g00269 213 PRINTS DnaJ domain signature 31 46 IPR001623 -
Accr6g00269 213 ProSiteProfiles dnaJ domain profile. 11 82 IPR001623 -
Accr6g00269 213 SMART dnaj_3 10 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00269 Accr-Chr6 4162291 4166154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00269 13 79 C2H2 Transcription Factor Family AT1G74250 47.059 2.93e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00269 - - lang:109338829 204.527