Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00233 ATGGGTGGCTGGACAGGAACAGATCCCGATTCCGGCGATTCTCCGGGATTGGAAGTAACCGGAAAGATCATGATCGTAGCTATACTTTTCCTCTTTTTCGTGATTGTTATCGTCTGTTTTCTCCATCTCTACGCCAGATGGTTCTGGTGGACCATTGAACGAAGCAACAGCACCACCGACGGCCACCACAACGGCCGCCGCCGCCGTCGCCGTCGCTTTGTCTTCTCACCAGGACAAGATCCCGCTATCAACGGCGTCCAGCGACGTGGACTTGAACCACAAGTCCTTAGATCCTTACCTGTATCCGTATACCGACCAGAGGATTTCAAAGATGGTCTGGAATGTGCAGTTTGTCTCAGCGAGCTTGCTGATGGAGAAAAAGCAAGGATATTACCTAAATGCAATCATGGGTTTCACGTAGAATGCATTGATATGTGGTTCCAATCACATTCTACTTGTCCAATTTGCAGGAACCTGGTCGCTTCTGAGTCCTCTGAACCCAATCACACTCTAGGTGTTCAACGAAATGTCTCGGACAATTATAGTGAATCATCAGACTCAGAAAGTTCAGATGCAATGAGCGAGGCAGATTTAGAGTCTGCAAATTTCCCTACAAATGTGTTGATTTGGGGAAATCAGGCCCAAGTAAATTCTATTGGCGGAGGTCCTTCTGTTCAGGCACCGTCTTCATCATCATCATCATCATCGGCTGCAGCAGATAGTTGCAGTAGTAGTAACAATAACCATAGACGCAATGGAATGTTGGTGATTGACATACCAAGAGAGATGAATCCATCATCTTTAGCTTCTACTAGCAGGTGTGCTGAAGATGATTTGAAGTCACCAATGACTTCCAGACTCCAATCATTCAAGAGGATGTTAAGCATGAAGTTCAGTCCTCGAAGTCCTAGTTCTGTAGATGTGGAACAAGCAGGGAGAGGACAGAGCTAG 951 0.4658 MGGWTGTDPDSGDSPGLEVTGKIMIVAILFLFFVIVIVCFLHLYARWFWWTIERSNSTTDGHHNGRRRRRRRFVFSPGQDPAINGVQRRGLEPQVLRSLPVSVYRPEDFKDGLECAVCLSELADGEKARILPKCNHGFHVECIDMWFQSHSTCPICRNLVASESSEPNHTLGVQRNVSDNYSESSDSESSDAMSEADLESANFPTNVLIWGNQAQVNSIGGGPSVQAPSSSSSSSSAAADSCSSSNNNHRRNGMLVIDIPREMNPSSLASTSRCAEDDLKSPMTSRLQSFKRMLSMKFSPRSPSSVDVEQAGRGQS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00233 316 SUPERFAMILY RING/U-box 94 162 - -
Accr6g00233 316 MobiDBLite consensus disorder prediction 298 316 - -
Accr6g00233 316 MobiDBLite consensus disorder prediction 264 316 - -
Accr6g00233 316 MobiDBLite consensus disorder prediction 167 197 - -
Accr6g00233 316 MobiDBLite consensus disorder prediction 219 251 - -
Accr6g00233 316 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 163 IPR044675 -
Accr6g00233 316 MobiDBLite consensus disorder prediction 264 292 - -
Accr6g00233 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 162 IPR013083 -
Accr6g00233 316 CDD RING-H2_EL5-like 114 157 - -
Accr6g00233 316 Pfam Ring finger domain 114 157 IPR001841 -
Accr6g00233 316 SMART ring_2 115 156 IPR001841 -
Accr6g00233 316 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Accr6g00233 316 FunFam RING-H2 finger protein ATL3 83 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00233 Accr-Chr6 3644552 3645502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00233 16 295 C3H Transcription Factor Family AT1G53820 42.662 2.78e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00233 - - jre:109020298 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00233 6 3644552 3645502 Accr6g00233 6 3644552 3645502 ECH