Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00211 ATGGCGAACGTAGCTCCTGAGCTGGAATCCAGGATTGTGGGGTTTGGATTTCGTCCAACTGATGTAGAGCTCGTGAAGCACTACCTGAACAAGAAATTGTCAGGCCAAGATCCCGTTCTCCAGATTATCCCTGTGATTGAACTTTGTAAGCATGAGCCCGGGGATATACCAGGCTTACCAGAGCTCTCGATCATCAAGTCGGACGACCCACAGTGGTTCTTCTTCAGTCCTCCCGATTACAAGTACAAGAAGAACTCTAACAGTAAACTGTCCAACAGGTCAACAAATTCTGGCTTCTGGAAACCCACTGGCAAAGACAGGGACATCAAGGTTCAAGGTGTCAAAATTGGGACCAAGAAGACTCTGGTTTTCTTTGTTCGTCGTGGCCTCGTCAGTACTAACTGGGTCATTCATGAATACCACGCATTTCCTGAAGACCAGAGGGCCTTTGTTCTTTGCAAGTTAATGAAGAAACATAAGAAAGCAAAAGGGAGAACCGGTGAAAAGGGGGATCCAAATAACTTTATGCCTTCTGATGACTATGAAAGTGTACCAAGTGAGGGTAGAATTCCAGATGCAAACGTTTGTCCCGAAAACAATCTGGATGAAATGCTTCAGACACAACAATCAGCAGATGAATATGAGATGCGCTTGCTCGTTTTATCTCCGAATGTCAATGAGCAGGAACTTTCTTCTCTATTTCCCCCAGGGTTCAATTCCCATACTCGAAATGACGACAGCATTGCAAACGTGCCTCCTAAATTTACTGAAGAGGAAGTCAATTTCGGGAATTCACTCCTTGTTGATGATGAGGACGAATTGTACTAG 828 0.4481 MANVAPELESRIVGFGFRPTDVELVKHYLNKKLSGQDPVLQIIPVIELCKHEPGDIPGLPELSIIKSDDPQWFFFSPPDYKYKKNSNSKLSNRSTNSGFWKPTGKDRDIKVQGVKIGTKKTLVFFVRRGLVSTNWVIHEYHAFPEDQRAFVLCKLMKKHKKAKGRTGEKGDPNNFMPSDDYESVPSEGRIPDANVCPENNLDEMLQTQQSADEYEMRLLVLSPNVNEQELSSLFPPGFNSHTRNDDSIANVPPKFTEEEVNFGNSLLVDDEDELY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00211 275 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Accr6g00211 275 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Accr6g00211 275 SUPERFAMILY NAC domain 7 158 IPR036093 GO:0003677|GO:0006355
Accr6g00211 275 MobiDBLite consensus disorder prediction 163 184 - -
Accr6g00211 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 184 - -
Accr6g00211 275 Pfam No apical meristem (NAM) protein 13 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00211 Accr-Chr6 3386034 3387649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00211 5 181 NAC Transcription Factor Family AT4G35580 47.312 3.04e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00211 NAM 3.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00211 - - pcin:129287580 248.44