Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00210 ATGGCGAACGTAGCTCTTGTGCTGGAATCCATGCCTGTGGGGTTTAGATTCCGTCCAACGGATGAAGAGCTCGTGAATCACTACCTGACCAATAAATTGATCGGCGATGCCGATAATCTCGATCTCCAGATTATCCCTGAGATTGACGTTTGTAAGAATGAGCCCTGGGATATACCAGCGTTCTCGATGATCAAGTCGGACGACCCAGAATGGTTCTTCTTCAGTCCTCGCGATTACAAGTACTCTAACAGTACTCGCTCTAACAGGGCAACAATGTGTGGCTTCTGGAAATCCACTGGCAAAGACAGGAACATCAAGGTTCGAGGTTCCAACGAGGTCATTGGGACCAAGAAGACTCTGGTTTTCTATAGAGGTCGTGTTCCTAATGGCGTCAAGACTCACTGGGTCATTCATGAATATCACGCCGTAACATTTCCTTCTGACCAGAGGACCTTTGTTCTTTGCAAGTTAATGAAGAAACATGAGAAAGCAGAAGGGAGAACCGGTGATGAGGGGGAGCCAAGTAACTTTATGCCTTCTGACTGTGAAATTGTACCAAGTGAGGGTAGAATTCCAGATGTACATCCTTTTCCCCAAAACAATCTGGAATCAATGTTTCAGACACAAGAATCAGCAGATGAATATGACTTGAGCTTTTTCCCTTCATCTCCAATTGTCAATGAGCAGGAATTTTTTTTCCCTAGAAATAACGACAGCAGTGTAAATGTGCCTTTTGAAACTACTGAAGAGGAAGACAATTTTGTGAATTCACTCCTTGTTGATGACGAGGAGAAAGTGTACTTGAATAGAATGATTGCTCCTATCCATTCTCCCACCCTCGCAGAACCTTCAGGGGTATACTGGGAAAGCAGTGACACAGATGCAGAAGTTGTCTCTGCACAGTATGGATATATTCCAGAGACTTCAATTAAATCTTATAAAAATGATGGTCCAAGGGAAATCCTGCTACTATCAAAGGTTAACAGCTCTGAACTTCCTTCAAACCGAGAAGCAAAACAAGAGAGAAAGGGAAGATCTTTTCAAGATGATTTTGACTCTTCCTCTGCTGACTCAACCCCTGCTAGACCATTTAGGATCAATCGGGTAAAGCATGTGGCCTCTGCTTCCACTTCAAAGACCTGGAAAACCCAATATCAACCAAGATCAGCTGCATCTCTGTCACTGAGAGCTGGGGCTAGAAGATCTCAGGCACACAGGAAGATTTCAACCAAAGAGGCATATCATGAGGCTCAGAAAGAAACACCAGTGCATTCAAACAATAATAAGAGAGAAGCACAGGTTACTGATAAAAGAAGTACTTCAAAATCCCCAAGGAGTGAATCCTCTGGTGTTAATGGGAGGAATACTTTCATTCAACTGGAGACACCATCATCAAGCCAAAACCTTAGTTCACCGTCCGTATATCTTGGCAATGTTGTTATAGGGCTTGTCCTGTTTGTAGTCATTATTTGGGAAATGCTATCATGTGGGAAGTTCTTTTAG 1503 0.4325 MANVALVLESMPVGFRFRPTDEELVNHYLTNKLIGDADNLDLQIIPEIDVCKNEPWDIPAFSMIKSDDPEWFFFSPRDYKYSNSTRSNRATMCGFWKSTGKDRNIKVRGSNEVIGTKKTLVFYRGRVPNGVKTHWVIHEYHAVTFPSDQRTFVLCKLMKKHEKAEGRTGDEGEPSNFMPSDCEIVPSEGRIPDVHPFPQNNLESMFQTQESADEYDLSFFPSSPIVNEQEFFFPRNNDSSVNVPFETTEEEDNFVNSLLVDDEEKVYLNRMIAPIHSPTLAEPSGVYWESSDTDAEVVSAQYGYIPETSIKSYKNDGPREILLLSKVNSSELPSNREAKQERKGRSFQDDFDSSSADSTPARPFRINRVKHVASASTSKTWKTQYQPRSAASLSLRAGARRSQAHRKISTKEAYHEAQKETPVHSNNNKREAQVTDKRSTSKSPRSESSGVNGRNTFIQLETPSSSQNLSSPSVYLGNVVIGLVLFVVIIWEMLSCGKFF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00210 500 MobiDBLite consensus disorder prediction 371 391 - -
Accr6g00210 500 ProSiteProfiles NAC domain profile. 11 160 IPR003441 GO:0003677|GO:0006355
Accr6g00210 500 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Accr6g00210 500 MobiDBLite consensus disorder prediction 335 350 - -
Accr6g00210 500 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 235 - -
Accr6g00210 500 Gene3D NAC domain 20 165 IPR036093 GO:0003677|GO:0006355
Accr6g00210 500 MobiDBLite consensus disorder prediction 331 455 - -
Accr6g00210 500 MobiDBLite consensus disorder prediction 405 443 - -
Accr6g00210 500 Pfam No apical meristem (NAM) protein 12 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00210 Accr-Chr6 3370752 3373813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00210 5 171 NAC Transcription Factor Family AT4G35580 56.647 9.03e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00210 NAM 2.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00210 - - pcin:129287580 640.958