Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00209 ATGGTGGACGTCGCAGCTCCTATGCAGCAAGGTTTGCCGGTGGGTTTCAGATTCCGTCCGACCAATGAAGAACTCGTCGGCCACTACCTCCACCGGAAATTGTTGGCTGATGATCCTTCTATCCATCACATCATCCCTGAGATTGACGTGTGCAAGTTCGAACCTTGGGAATTACCAGCGATTTCACTGAACACAGCAGACGATCCAGAATGGTATTTCTTCAGTCCTCGCCATTACAAGCACTCAAACGGTACTCGGCGGAATAGGGCAACGGTGCGTGGCTACTGGAAACTCACCGGTAAAGAGAGGAACATCCGAGATCCAATCACCAACAATATTATTGGGACGAAGAAAACCCTAGTTTTCTACGATCATGGCAATAAAAGCAATTGGGTTATTCATGAATACCACGATGCGATCTTCCATCCAGATCAGAGAACTCATGTTCTATGTAAGTTATTAAAGAAGCCAGAGAAGAAAACAGAAGAAAAATCAGATGAGTTGATTTATGATGAAAGCGAGCCAAATGACCATATTGCATCTGAATATGCAAATCCAGAAAATGTTTATGCGATTCCAGAAGTACAGTATTTCACATATATGGAGGATTCAATGATGACTCAAACACCTTTGGAGTCAGATGACCTTGGAAGCTCAATGACTCAAACACCTCAGGAAGTGGATTCAACAATGGAGGAGTCAGAAGAATTTGATTTCAGATCATTCTTGCGGTCGTCTCCAAGTAGGGATGATGAGTAA 759 0.4361 MVDVAAPMQQGLPVGFRFRPTNEELVGHYLHRKLLADDPSIHHIIPEIDVCKFEPWELPAISLNTADDPEWYFFSPRHYKHSNGTRRNRATVRGYWKLTGKERNIRDPITNNIIGTKKTLVFYDHGNKSNWVIHEYHDAIFHPDQRTHVLCKLLKKPEKKTEEKSDELIYDESEPNDHIASEYANPENVYAIPEVQYFTYMEDSMMTQTPLESDDLGSSMTQTPQEVDSTMEESEEFDFRSFLRSSPSRDDE 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00209 252 ProSiteProfiles NAC domain profile. 12 156 IPR003441 GO:0003677|GO:0006355
Accr6g00209 252 SUPERFAMILY NAC domain 7 156 IPR036093 GO:0003677|GO:0006355
Accr6g00209 252 MobiDBLite consensus disorder prediction 206 252 - -
Accr6g00209 252 MobiDBLite consensus disorder prediction 234 252 - -
Accr6g00209 252 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Accr6g00209 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 173 - -
Accr6g00209 252 MobiDBLite consensus disorder prediction 206 228 - -
Accr6g00209 252 Gene3D NAC domain 21 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00209 Accr-Chr6 3356437 3357915 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00209 4 173 NAC Transcription Factor Family AT4G35580 48.333 8.60e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00209 NAM 7.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00209 - - pcin:129287716 249.595