Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00208 ATGGCTGAAACAACCATGGCGCCGGCCCATCTAGCTCCGGCGGAGAGACGTACGGCTGTTGGGTGGAGGTTTCATCCGACCGACCAAGAACTCGTCAGTCACTTCCTCCGCCACAAATTGAAGGCTGAGGATCTTCCCATTGACGAAACCATCCCTGAGATTGGCGTCTGCAAGGGTGAACCCTGGGATTTATTAGAATGGGCTGCTTCCGCTTCAGGAGGCAAGTTTGATGAATCACAATGCTTTTTCTTCAGTCCTCGCGACTATAAGTACTCTAACAGTAATAGGTCGAACAGAACAACATCGTGTGGCTTCCGGAAAGTAACTGGTAGAGACCGTAAAATCACATGTAAAAACACCAACAAAGTTATTGGCACCAAGAAGACCCTAGTTTTCTATAGAGGCCGTGTTCCTCGTGCAATCAAAACTCACTGGATTATTCATGAATATCATGATTCCGAATTATCCCATGACCAGTTGTTGCAGAGGACTTATGTTGTTTGTTGGTTAAGAGAGGATAATAAAAAGAAAATGGAAGAAAAAACTCGTCAACTAGAAAAGAAAACAGAAGGAAAAACTCATCAACTAGAAAAGAAAACACAAGAAAAAACTCATCAACTAGAAAGAAGGACATGTAACCGTATCATATTGAAGCATGGAAATCAAACAAATTCAGAAGAACACACATCCTCAAATACAATGATTCAAGTATCTTCCGAATCAAATGAAGAGTCAATGAATCAAATATCTTCTCAATCAAATGGAATTATTAACCCAATACAACAAATATATCCTCAATCATATGAAGCCCGAAGCTCAGTGATTGAACCACCTTTCGAACTAGATGAAGAATTAGCTTCAATTCTTCATACACCAGTACACCACTACCTGAATCAAATTTTACCACAGTAG 912 0.4057 MAETTMAPAHLAPAERRTAVGWRFHPTDQELVSHFLRHKLKAEDLPIDETIPEIGVCKGEPWDLLEWAASASGGKFDESQCFFFSPRDYKYSNSNRSNRTTSCGFRKVTGRDRKITCKNTNKVIGTKKTLVFYRGRVPRAIKTHWIIHEYHDSELSHDQLLQRTYVVCWLREDNKKKMEEKTRQLEKKTEGKTHQLEKKTQEKTHQLERRTCNRIILKHGNQTNSEEHTSSNTMIQVSSESNEESMNQISSQSNGIINPIQQIYPQSYEARSSVIEPPFELDEELASILHTPVHHYLNQILPQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00208 303 SUPERFAMILY NAC domain 12 170 IPR036093 GO:0003677|GO:0006355
Accr6g00208 303 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 204 - -
Accr6g00208 303 MobiDBLite consensus disorder prediction 178 205 - -
Accr6g00208 303 Gene3D NAC domain 27 180 IPR036093 GO:0003677|GO:0006355
Accr6g00208 303 Pfam No apical meristem (NAM) protein 20 151 IPR003441 GO:0003677|GO:0006355
Accr6g00208 303 ProSiteProfiles NAC domain profile. 18 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00208 Accr-Chr6 3341988 3343520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00208 20 170 NAC Transcription Factor Family AT1G33060 50.980 8.87e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00208 NAM 2.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00208 - - pcin:129322017 195.667