Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00207 ATGGCTGAAACAACCATGGCGCCGGCCCATCTAGCTCCGGCGGAGAGACGTACGGCTGTTGGGTGGAGGTTTCATCCGACCGACCAAGAACTCGTCAGTCACTTCCTCCGCCACAAATTGAAGGCTGAGGATCTTCCCATTGACGAAACCATCCCTGAGATTGGCGTCTGCAAGGGTGAACCCTGGGATTTATTAGAATGGGCTGCTTCCGCTTCAGGAGGCAAGTTTGATGAATCACAATGCTTTTTCTTCAGTCCTCGCGACTATAAGTACTCTAACAGTAATAGGTCGAACAGAACAACATCGTGTGGCTTCCGGAAAGTAACTGGTAGAGACCGTAAAATCACATGTAAAAACACCAACAAAGTTATTGGCACCAAGAAGACCCTAGTTTTCTATAGAGGCCGTGTTCCTCGTGCAATCAAAACTCACTGGATTATTCATGAATATCATGATTCCGAATTATCCCATGACCAGAGGACTTATGTTGTTTGTTGGTTAAGAGAGGATAATAAAAAGAAAATGGAAGAAAAAACTCGTCAACTAGAAAAGAAAACAGAAGGAAAAACTCATCAACTAGAAAAGAAAACACAAGAAAAAACTCATCAACTAGAAAGAAGGACATGTAACCGTATCATATTGAAGCATGGAAATCAAACAAATTCAGAAGAACACACATCCTCAAATACAATGATTCAAGTATCTTCCGAATCAAATGAAGAGTCAATGAATCAAATATCTTCTCAATCAAATGGAATTATTAACCCAATACAACAAATATATCCTCAATCATATGAAGCCCGAAGCTCAGTGATTGAACCACCTTTCGAACTAGATGAAGAATTAGCTTCAATTCTTCATACACCAGTACACCACTACCTGAATCAAATTTTACCACAGTAG 903 0.4053 MAETTMAPAHLAPAERRTAVGWRFHPTDQELVSHFLRHKLKAEDLPIDETIPEIGVCKGEPWDLLEWAASASGGKFDESQCFFFSPRDYKYSNSNRSNRTTSCGFRKVTGRDRKITCKNTNKVIGTKKTLVFYRGRVPRAIKTHWIIHEYHDSELSHDQRTYVVCWLREDNKKKMEEKTRQLEKKTEGKTHQLEKKTQEKTHQLERRTCNRIILKHGNQTNSEEHTSSNTMIQVSSESNEESMNQISSQSNGIINPIQQIYPQSYEARSSVIEPPFELDEELASILHTPVHHYLNQILPQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00207 300 Gene3D NAC domain 27 176 IPR036093 GO:0003677|GO:0006355
Accr6g00207 300 ProSiteProfiles NAC domain profile. 18 170 IPR003441 GO:0003677|GO:0006355
Accr6g00207 300 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 237 - -
Accr6g00207 300 Pfam No apical meristem (NAM) protein 20 151 IPR003441 GO:0003677|GO:0006355
Accr6g00207 300 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
Accr6g00207 300 MobiDBLite consensus disorder prediction 176 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00207 Accr-Chr6 3341988 3343520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00207 20 167 NAC Transcription Factor Family AT1G33060 50.980 5.13e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00207 NAM 2.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00207 - - pcin:129322017 201.06