Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00205 ATGGCTCCGTCTGATCTAGCTCCAGCGGAGAGACCTATGCCTGTTGGGTGGAGGTTTCATCCGACCGACCAAGAGCTCATCGACCACTACCTCCGCCACAAATTGAAGGCTGGCGATCTTTCCATACAAGACACCATCCCTGAGATTGGCGTCTGCAAGTATGAACCCTGGGAATTATTAGATCGGGTTGCTTCTGCTTCAGCAGCCAAGTTTGATGAATCACAGTGCTTTTTCTTTAGTCCTCGCGACTATAAGTCCTCTAACAGTACTCGGTCGAACAGAGCAACCTTGCGTGGCTTCTGGAAGGTAACTGGTAGAGACCGTAAAATCACAAGTAAAGACACCAACAAAGTTATTGGGACCAAAAAGACCCTCGTTTACCATGAAGGCCGCGTTCCTCATGGAATCAAAACTAACTGGGTTATTCATGAATATCATGATGCCCAGTTATCTCATAACGAGAGGACTCATGTTCTTTGTTGGTTAAGGAAGGATAATAAGAAGAAAACAAAAGAAAAAACTCATCAACTTGTTGATGAAAGAAGGACAATTAGCTTTGAGTATGAAAATCAAGCAAATATATGTATGAATTCAGAAGAACAGTATTTCTCAAATAGAAGTTCAATGGTTCAAACACCTTCCCATTCAAACAAAGCTATAGACTCAATGATTCAAATACCTTTTGGATCGGATGAAGCTATAGACTCAACAATTCAAACAACTTCCCAAACAAAAGGAGCTATAGACTTAACGATTCAAATACCTTTTGGATCAGATGAAGCTATAGACTCAACCATTCAAACAACTTCCCAATCAAAAGGAGCTATAGACTCAACGATTCAAATACCTTTTGGATCAGATGAAGCTATAGACTCAACCATTCAAACAACTTCCCAATCAAAAGGAGCTATAGACTCAACGATTCAAATACCTTTTGGATCAGATGAAGCTATAGACTCAACCATTCAAACAACTTCCCAATCAAAAGGAGCTATAGACTCAACGATTCAAATACCTTTTGGATCAGATGAAGCTATAGACTCAACCATTCAAACAACTTCCCAATCAAAAGGAGCTATAGACTCAACGATTCAAATACCTTTTGGATCAGATGAAGCTATAGACTCAACCATTCAAACAACTTCCCAATCAAAAGGAGCTATAGACTCAACGATTCAAGTACCTTTTGGATCAGATGAAGCTATAGACTCAACGATTCAAAAACCTTCCCAATCAAAAGGAGCTGTAGACTCAATGATTCAAGTACCTTTTGGATCAAAAGGTCCAATGATTCATAAACTGTCCCCTGAACCAAATTCTATTGTTGAAACATCATTTGACGCAGGTGAATTTGGCTTCAGCTTATTTGACTCGGGTGAATTTGACTTGAACTCACTCTTGCAATCTCCAAGTAAAGATGAGCAGGGGCTATTCAACTTATTTGACTCAAGTGAATTTGACTTCACCACACTCTTGCAATCTCCAGGGAGAGATGAGCAAGGGCTGTTCGAAATGATGGCAACATCTGATATGCGTTGTCATGAAGCATAG 1551 0.4004 MAPSDLAPAERPMPVGWRFHPTDQELIDHYLRHKLKAGDLSIQDTIPEIGVCKYEPWELLDRVASASAAKFDESQCFFFSPRDYKSSNSTRSNRATLRGFWKVTGRDRKITSKDTNKVIGTKKTLVYHEGRVPHGIKTNWVIHEYHDAQLSHNERTHVLCWLRKDNKKKTKEKTHQLVDERRTISFEYENQANICMNSEEQYFSNRSSMVQTPSHSNKAIDSMIQIPFGSDEAIDSTIQTTSQTKGAIDLTIQIPFGSDEAIDSTIQTTSQSKGAIDSTIQIPFGSDEAIDSTIQTTSQSKGAIDSTIQIPFGSDEAIDSTIQTTSQSKGAIDSTIQIPFGSDEAIDSTIQTTSQSKGAIDSTIQIPFGSDEAIDSTIQTTSQSKGAIDSTIQVPFGSDEAIDSTIQKPSQSKGAVDSMIQVPFGSKGPMIHKLSPEPNSIVETSFDAGEFGFSLFDSGEFDLNSLLQSPSKDEQGLFNLFDSSEFDFTTLLQSPGRDEQGLFEMMATSDMRCHEA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00205 516 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 183 - -
Accr6g00205 516 ProSiteProfiles NAC domain profile. 13 165 IPR003441 GO:0003677|GO:0006355
Accr6g00205 516 Pfam No apical meristem (NAM) protein 14 146 IPR003441 GO:0003677|GO:0006355
Accr6g00205 516 Gene3D NAC domain 22 178 IPR036093 GO:0003677|GO:0006355
Accr6g00205 516 SUPERFAMILY NAC domain 7 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00205 Accr-Chr6 3326672 3328818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00205 13 162 NAC Transcription Factor Family AT1G33060 49.677 2.78e-41 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00205 NAM 6.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00205 - - pcin:129322017 270.011