Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00204 ATGGCGGAGGAAGTTCCTCTGCAGCAAGATAGGCCGCCGCCGGTAGGGTACAGATTCCATCCGACGGATGAAGAGCTCGTCGATCACTACCTCCGCCACAAATTGTTGGCTGATGATCCTTCCATCCACAACACCATCTCTGAAATTGACATCTGCAATTTCGAACCCTGGGATTTACCACCGTTTTCACAGATCGAATCGGACGACCCCGAATGGTATTTCTTCAGTCCTATCAAATACAAGTACTCAAACAGTACTAAGGCTCATAGGGCAACATCGGGTGGCTACTGGAAAGCCACCGGTAGAGACAGGAAAATCCGGGATCCGGTTACTGACAATGTTATTGGGACTAAGAAGACCTTAGTTTTCTATCAAGGAAAAAATGTCCCTGGCATTAGAAATAATTGGGTTATTCATGAATACCATGACGCCCGTTTTCCTCAACATGAGAGAACACATGTTCTATGTAAGTTATTGAAGAAACCCGAGAAGAAAACAAAAGAAAAAACGGATGAGCTGGTTCGTGATGAATGCGAGCCAAATGACTCTATCCCTTCTGAGTATGAAAATCAAGCAAATCCAGAAGATGTGGATTCATTATTGATTCAAACACATGGGGAGTCGAATGGCTCGTCAAGAATTCAGACATCTTCTGAAGTGGACTCGACCGTTGAGACGCCACAAGGAGACTCAGAAGAATTTGACGTCAATTCGTTCTTGTTGTTTCCTGATGATGACCGTTACTTGCCTCCAAGTATGGATGGTTGGAAATGGTAA 777 0.4453 MAEEVPLQQDRPPPVGYRFHPTDEELVDHYLRHKLLADDPSIHNTISEIDICNFEPWDLPPFSQIESDDPEWYFFSPIKYKYSNSTKAHRATSGGYWKATGRDRKIRDPVTDNVIGTKKTLVFYQGKNVPGIRNNWVIHEYHDARFPQHERTHVLCKLLKKPEKKTKEKTDELVRDECEPNDSIPSEYENQANPEDVDSLLIQTHGESNGSSRIQTSSEVDSTVETPQGDSEEFDVNSFLLFPDDDRYLPPSMDGWKW 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00204 258 MobiDBLite consensus disorder prediction 206 236 - -
Accr6g00204 258 MobiDBLite consensus disorder prediction 166 182 - -
Accr6g00204 258 SUPERFAMILY NAC domain 12 161 IPR036093 GO:0003677|GO:0006355
Accr6g00204 258 Gene3D NAC domain 22 167 IPR036093 GO:0003677|GO:0006355
Accr6g00204 258 Pfam No apical meristem (NAM) protein 14 142 IPR003441 GO:0003677|GO:0006355
Accr6g00204 258 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 208 - -
Accr6g00204 258 MobiDBLite consensus disorder prediction 166 193 - -
Accr6g00204 258 MobiDBLite consensus disorder prediction 206 233 - -
Accr6g00204 258 ProSiteProfiles NAC domain profile. 13 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00204 Accr-Chr6 3320839 3322170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00204 14 203 NAC Transcription Factor Family AT4G35580 44.388 2.29e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00204 NAM 6.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00204 - - pcin:129287716 272.322