Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00203 ATGGCAGATCCGACGATGATGCAGAGACGTGTGCCTCCAGGACACAGATTCTGTCCGACCGACGAAGAGCTCGTCGCTTACTACCTCCACCCCAAATTGATGGCTCATGATCCTTCTATTTATAACACCATCCCTGAGATTGACGTTTGCAAGTACGAACCTTGGGAATTACCAGCTCTGGCTGCTTCAGCCTCTCCAGAGACGGAGCAAACTGACTCAGCATGCTATTTCTTCAGTCGTTGCGATTACAAGTACTCTAACAGTACTCGGTTTAAAAGGACAACATCACATGGCTTCTGGAAAGTCACCGGTAAAGACAGACTGATCAAAGACCGAGAGACCAACAATGTCATTGGGATTAAGAAAATTCTAGTATATTACCAAGGACGTTTTCCTCATGGGAACCGATGCAATTGGGTCATTCATGAATATCATGATGTCATGTTCTCTTCGGAACAAAGGACCTATGTAGTATGCAAACTGAAGAAGAAACATGAGAAGAAAATGAAAGAAAAAATTAATGACTTTGAGCACGGATCAATTTGTCAGGAAAGAGAGTCCAATAATCATACAAAATTTGAGTATGAAAACTCAACAAATTTCTCTATCCTTTCAAAGGAACATTATTTGTCAAATATGAACACATCAGTTCAAACATCTTCACATCCTGAAGTTATGGATTCACCAATTCATACATCTTTCCAACAAGATGAAGTTATAAACGCACCAACTCAAACTTATTTCCAACCAAATGACGATATAGATTCAATGATTCAAGATCTATCAAATGAAGCTATAGACTCCATGATTCAAGCACTTTACCAGTAA 828 0.3961 MADPTMMQRRVPPGHRFCPTDEELVAYYLHPKLMAHDPSIYNTIPEIDVCKYEPWELPALAASASPETEQTDSACYFFSRCDYKYSNSTRFKRTTSHGFWKVTGKDRLIKDRETNNVIGIKKILVYYQGRFPHGNRCNWVIHEYHDVMFSSEQRTYVVCKLKKKHEKKMKEKINDFEHGSICQERESNNHTKFEYENSTNFSILSKEHYLSNMNTSVQTSSHPEVMDSPIHTSFQQDEVINAPTQTYFQPNDDIDSMIQDLSNEAIDSMIQALYQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00203 275 SUPERFAMILY NAC domain 5 164 IPR036093 GO:0003677|GO:0006355
Accr6g00203 275 ProSiteProfiles NAC domain profile. 11 164 IPR003441 GO:0003677|GO:0006355
Accr6g00203 275 Pfam No apical meristem (NAM) protein 12 145 IPR003441 GO:0003677|GO:0006355
Accr6g00203 275 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
Accr6g00203 275 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00203 Accr-Chr6 3314152 3315383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00203 11 172 NAC Transcription Factor Family AT3G49530 44.311 8.13e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00203 NAM 9.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00203 - - pcin:129322017 267.314