Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00201 ATGGCTGAGACAACCATGGCTCCGGCGGATCTAGCTCTGGCGGAGAGATCTATGCCTGTTGGGTGCAGGTTTCATCCGACCGACCAAGAGCTCGTTGGCCACTACCTCGGCCACAAATTGAGGGCTGACGATCCTTTCATTCACGACACCATCCCTGAGTTTGGCCTCTGCAAGGGTGAACCCTGGGATTTATTAGAGTGGGCTACTTCCGCTTCAGCAGTCAAGTTTGATGAATCACAATGCTATTTCTTCAGTCCTCGCGACCCTAAGTACTCTAACAGTACTCGGTCGAACAGAGCAACCTTAGGTGGCTTCTGGAAATTAACTGGTAGAGACCGTAAAATCACAAGTAAAGGTACCAACAAAGTTATTGGGACCAAGAAGACCCTGGTTTATTATGAAGGCCGTGTTCCTCGTGCAATCAAAACTAACTGGATAACTCATGAATATGAATATCATGATGACAAGTTATCTCATGACCAGAGGTCTCATGTTCTTTGTTGGTTAAGGAAGGATAATGAGAAGAAAACAAAACAAAAAACTCATCAACTAGTTGATGATTATGGAAGTCAAGCAATTATATGTATGAATTCAGATGAACACTGTATGAGTTCAATGATTCAAGGATCTTCCGAATCAAGTGAAGTTATAGACTCAATGATTCAAATGCCATTTGGATCAAATGAAGCTGTAGAATCAATGATTCAAGTATCTTCTCAATCAAATAGAACTATAGACTCAATGATTCAAATACCTTTTGAATCAAATGAAGTTATAGACTCATTGATTGAATTATCTTCCCAATCTAATGGAGCTATAGACCCAATGATTCAAATACTTTTTGAATCAAATGAAGTTGTAGACTCCTCTCAATCAAATGAAGCTATAGACTCAATGATTCAAAAACTTTTTGAATCGAGGTTGTAG 927 0.3981 MAETTMAPADLALAERSMPVGCRFHPTDQELVGHYLGHKLRADDPFIHDTIPEFGLCKGEPWDLLEWATSASAVKFDESQCYFFSPRDPKYSNSTRSNRATLGGFWKLTGRDRKITSKGTNKVIGTKKTLVYYEGRVPRAIKTNWITHEYEYHDDKLSHDQRSHVLCWLRKDNEKKTKQKTHQLVDDYGSQAIICMNSDEHCMSSMIQGSSESSEVIDSMIQMPFGSNEAVESMIQVSSQSNRTIDSMIQIPFESNEVIDSLIELSSQSNGAIDPMIQILFESNEVVDSSQSNEAIDSMIQKLFESRL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00201 308 Pfam No apical meristem (NAM) protein 19 151 IPR003441 GO:0003677|GO:0006355
Accr6g00201 308 SUPERFAMILY NAC domain 9 171 IPR036093 GO:0003677|GO:0006355
Accr6g00201 308 Gene3D NAC domain 27 178 IPR036093 GO:0003677|GO:0006355
Accr6g00201 308 ProSiteProfiles NAC domain profile. 18 172 IPR003441 GO:0003677|GO:0006355
Accr6g00201 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00201 Accr-Chr6 3269010 3270561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00201 13 173 NAC Transcription Factor Family AT3G17730 48.171 2.01e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00201 NAM 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00201 - - pcin:129322017 255.373