Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00199 ATGGCGGATCCGACCACGATGCAGAGACGTGTGCCTGTAGGATACAGATTCTGTCCGACCGAGGAAGAGCTCGTCGCTTACTACCTCCACCCCAAATTGATGGCTCCTGATCCTTCCATTTATCACACTATCCCTGAAATTGACGTTTGCAAGTACGAACCTTGGGAATTACCAGCTCTGACTGCTTCAGCGTTTCCAGAGATGGAACAAGATGACTCAGAATGCTATTTCTTCAGTCGTTGCGATTACAAGTACTCTAACAGTACTCGATTTAATAGGACAACACCGCTTGGGTTCTGGAAAGTCACCGGTAAAGCTAGACCAATCAAACACCGTGACACCAACAAAGTCATTGGAATTAAAAAAAATCTAGTATATTACGAAGGGCGTGTTCCTCATGGGATCCGAAGTAATTGGGTCATTCATGAATACCATGATGACTTGTTTCCACCTGAACAAAGGACCTATGTAGTATGCAAACTAATGAAGAAAGATGAAAAGAAAACAAAAGAAAAACCTAATGACTTTGAGCACGAGTCAATTGGCCATGAAATGGGGTCCCATAATCATACCGATTTTGAGTATGAAAACCCAGCAAATTTCTCCATCCTTTCAAAGGAACATTACTTATCAAATATGAACTCAACGGTTCAAACACCTTTTCACCCTGAAGTTATGGATTCGGTAATTCATACATATCAACCAAATGAAGCTATAAACTCAAAGACTTGGACTTCTTTGCAACCAGACGAAGAATGCCAGCCAAATGAGGATATAGACTCAATGATTCAATCATTTTACGCGCCCAATGAAGTTTTACAACCAGAACTGAATTCAATCATGGACCCACCACTTGGTTTTGGTTATGAGGAATTTTACTAA 882 0.4093 MADPTTMQRRVPVGYRFCPTEEELVAYYLHPKLMAPDPSIYHTIPEIDVCKYEPWELPALTASAFPEMEQDDSECYFFSRCDYKYSNSTRFNRTTPLGFWKVTGKARPIKHRDTNKVIGIKKNLVYYEGRVPHGIRSNWVIHEYHDDLFPPEQRTYVVCKLMKKDEKKTKEKPNDFEHESIGHEMGSHNHTDFEYENPANFSILSKEHYLSNMNSTVQTPFHPEVMDSVIHTYQPNEAINSKTWTSLQPDEECQPNEDIDSMIQSFYAPNEVLQPELNSIMDPPLGFGYEEFY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00199 293 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 179 - -
Accr6g00199 293 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
Accr6g00199 293 Pfam No apical meristem (NAM) protein 12 145 IPR003441 GO:0003677|GO:0006355
Accr6g00199 293 SUPERFAMILY NAC domain 5 164 IPR036093 GO:0003677|GO:0006355
Accr6g00199 293 ProSiteProfiles NAC domain profile. 11 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00199 Accr-Chr6 3198384 3199757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00199 11 166 NAC Transcription Factor Family AT3G49530 47.826 6.67e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00199 NAM 3.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00199 - - pcin:129322017 250.751