Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00198 ATGGCGGATCCGACCACGATGCAGAGACGTGTGCCTGTAGGATACAGATTCTGTCCGACCGAGGAAGAGCTCGTCGCTTACTACCTCCACCCCAAATTGATGGCTCCTGATCCTTCCATTTATCACACTATCCCTGAAATTGACGTTTGCAAGTACGAACCTTGGGAATTACCAGCGTTTCCAGAGATGGAACAAGATGACTCAGAATGCTATTTCTTCAGTCGTTGCGATTACAAGTACTCTAACAGTACTCGATTTAATAGGACAACACCGCTTGGGTTCTGGAAAGTCACCGGTAAAGCTAGACCAATCAAACACCGTGACACCAACAAAGTCATTGGAATTAAAAAAAATCTAGTATATTACGAAGGGCGTGTTCCTCATGGGATCCGAAGTAATTGGGTCATTCATGAATACCATGATGACTTGTTTCCACCTGAACAAAGGACCTATGTAGTATGCAAACTAATGAAGAAAGATGAAAAGAAAACAAAAGAAAAACCTAATGACTTTGAGCACGAGTCAATTGGCCATGAAATGGGGTCCCATAATCATACCGATTTTGAGTATGAAAACCCAGCAAATTTCTCCATCCTTTCAAAGGAACATTACTTATCAAATATGAACTCAACGGTTCAAACACCTTTTCACCCTGAAGTTATGGATTCGGTAATTCATACATATCAACCAAATGAAGCTATAAACTCAAAGACTTGGACTTCTTTGCAACCAGACGAAGAATGCCAGCCAAATGAGGATATAGACTCAATGATTCAATCATTTTACGCGCCCAATGAAGTTTTACAACCAGAACTGAATTCAATCATGGACCCACCACTTGGTTTTGGTTATGAGGAATTTTACTAA 867 0.4072 MADPTTMQRRVPVGYRFCPTEEELVAYYLHPKLMAPDPSIYHTIPEIDVCKYEPWELPAFPEMEQDDSECYFFSRCDYKYSNSTRFNRTTPLGFWKVTGKARPIKHRDTNKVIGIKKNLVYYEGRVPHGIRSNWVIHEYHDDLFPPEQRTYVVCKLMKKDEKKTKEKPNDFEHESIGHEMGSHNHTDFEYENPANFSILSKEHYLSNMNSTVQTPFHPEVMDSVIHTYQPNEAINSKTWTSLQPDEECQPNEDIDSMIQSFYAPNEVLQPELNSIMDPPLGFGYEEFY 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00198 288 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Accr6g00198 288 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Accr6g00198 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 174 - -
Accr6g00198 288 Gene3D NAC domain 20 165 IPR036093 GO:0003677|GO:0006355
Accr6g00198 288 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00198 Accr-Chr6 3198384 3199757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00198 11 161 NAC Transcription Factor Family AT3G49530 49.359 4.22e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr6g00198 NAM 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00198 - - pcin:129322017 247.669