Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00194 ATGGAATTGACACAAGAAGCTGCAAAAGCGTCTTCAGATTATAGCAGAGAAGAAGACTCACGGGAGGAGGAAGAAGATTTATTAGGTGAAACCAGTAATAATAAAGAAACCAGCTGGTTATTACACCATCATGATACACCATCTAATTCCAATTCGGCCATTGTTAACAACAATCCCAACAAGAAGCTGGACTTCATGGACTTATCACTCGGAAACAAGAAGGAAGAAGATGAAGCTAACAACAACAACAAAGCTATTGAGAAAGAGCACATGTTTGATAAGGTTGTGACACCCAGCGATGTGGGCAAACTGAACCGCCTCGTCATACCAAAACAACACGCCGAGAGGTATTTCCCGCTCGATTCATCCTCCAACGAGAAAGGCTTGCTCTTGAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCTTACTGGAATAGCAGCCAGAGCTATGTGATGACCAAAGGCTGGAGCCGTTTTGTTAAAGAGAAGAAGCTCGACGCCGGCGACATTGTTTCCTTCCAACGCGGCCTTGGTGAATTGTATAGACATAGGTTGTACATAGACTGGAGGCGCCGCCCCGATTACGCCGCTGCCGCTGATCATCTCCATCATCATCATCGCCATGCGGCCGCCACAATTACGCCGTTACTCCTCCCAAATCAGTATTCAATCAGATGGGATGGTAGATTATACTCGGTCCCCACGGTGGCGGCGCCGGTGATTCCTCCACCACCACCACCGCGACACCACGAACAATTCCAGCAAGTCAACTACAACAATTACCCCTTTCAGCAGCAGCAACAACAAGTACTTCAGTACCAGCGACAAGTACATCACCCCCACCACCAGCTCTATAGTGGAAGTCAAGGAAGCTATAATGAGCTGAATTTGGGATCTGGGTCATCGCTTTATTACCTGAGGACACCGTCAGCGTTGGCGGCTCCGGGAGATCGGAATTTAATGGAGCAGCGAGAGGGAGGAGGCGGCAATGTAAGTCCGATGATAATTGATTCGGTTCCAGTAGTTCATGGTAAGAGCATTTGTTCTACTAGTAGTGGTAGAATAATTGCTGATACTACAGCAAAGAAGCTTAGGCTATTTGGTGTGAACATGGAATGTTCTTCTTCTTCATCCAACACAATAGGACATCATGTCCCAATGGGTGATTCATCACTTTCCTCACCAAATCTTCAGTATTTGAGAGAATCGCATCATCATCATCATGAAGAAGAACAAGAAGAAGACCCATCACTTTCTTCATCATCATCAAGATTTGCAGATCAAAAGGGGAAAACTTCTGTCCTTTTTGATTTGAGCCCCTCCCTCCAATACCGACAGTAG 1353 0.4649 MELTQEAAKASSDYSREEDSREEEEDLLGETSNNKETSWLLHHHDTPSNSNSAIVNNNPNKKLDFMDLSLGNKKEEDEANNNNKAIEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGELYRHRLYIDWRRRPDYAAAADHLHHHHRHAAATITPLLLPNQYSIRWDGRLYSVPTVAAPVIPPPPPPRHHEQFQQVNYNNYPFQQQQQQVLQYQRQVHHPHHQLYSGSQGSYNELNLGSGSSLYYLRTPSALAAPGDRNLMEQREGGGGNVSPMIIDSVPVVHGKSICSTSSGRIIADTTAKKLRLFGVNMECSSSSSNTIGHHVPMGDSSLSSPNLQYLRESHHHHHEEEQEEDPSLSSSSSRFADQKGKTSVLFDLSPSLQYRQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00194 450 MobiDBLite consensus disorder prediction 27 42 - -
Accr6g00194 450 FunFam B3 domain-containing protein 85 206 - -
Accr6g00194 450 SMART B3_2 92 197 IPR003340 GO:0003677
Accr6g00194 450 MobiDBLite consensus disorder prediction 1 59 - -
Accr6g00194 450 SUPERFAMILY DNA-binding pseudobarrel domain 89 182 IPR015300 -
Accr6g00194 450 CDD B3_DNA 90 179 IPR003340 GO:0003677
Accr6g00194 450 MobiDBLite consensus disorder prediction 406 421 - -
Accr6g00194 450 MobiDBLite consensus disorder prediction 406 436 - -
Accr6g00194 450 MobiDBLite consensus disorder prediction 43 59 - -
Accr6g00194 450 Gene3D - 85 212 IPR015300 -
Accr6g00194 450 ProSiteProfiles B3 DNA-binding domain profile. 92 197 IPR003340 GO:0003677
Accr6g00194 450 MobiDBLite consensus disorder prediction 422 436 - -
Accr6g00194 450 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 393 IPR044800 GO:0003700
Accr6g00194 450 Pfam B3 DNA binding domain 92 196 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00194 Accr-Chr6 3174332 3175822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00194 67 380 RAV Transcription Factor Family AT2G46870 46.769 2.43e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr6g00194 B3 2.7e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00194 K09287 - gmx:100778733 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00194 6 3174332 3175822 Accr6g00194 6 3174332 3175822 ECH