Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00193 ATGGAATTGACACAAGAAGCTGCAAAAGCGTCTTCAGATTATAGCAGAGAAGAAGACTCACGGGAGGAGGAAGAAGATTTATTAGGTGAAACCAGTAATAATAAAGAAACCAGCTGTAAGCCATACTATCCCTTTTCTTCTTCTTCTAATTCTTCACATCCAAATCTATGGTTGGGGATGCATCATCATCAACAACAACAATCTCCGGAGGCCACAACCCCATGTGAATCTCACAATTCATCATCTGGGTTAGGGTTATTACACCATCATGATACACCATCTAATTCCAATTCGGCCATTGTTAACAACAATCCCAACAAGAAGCTGGACTTCATGGACTTATCACTCGGAAACAAGAAGGAAGAAGATGAAGCTAACAACAACAACAAAGCTATTGAGAAAGAGCACATGTTTGATAAGGTTGTGACACCCAGCGATGTGGGCAAACTGAACCGCCTCGTCATACCAAAACAACACGCCGAGAGGTATTTCCCGCTCGATTCATCCTCCAACGAGAAAGGCTTGCTCTTGAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCTTACTGGAATAGCAGCCAGAGCTATGTGATGACCAAAGGCTGGAGCCGTTTTGTTAAAGAGAAGAAGCTCGACGCCGGCGACATTGTTTCCTTCCAACGCGGCCTTGGTGAATTGTATAGACATAGGTTGTACATAGACTGGAGGCGCCGCCCCGATTACGCCGCTGCCGCTGATCATCTCCATCATCATCATCGCCATGCGGCCGCCACAATTACGCCGTTACTCCTCCCAAATCAGTATTCAATCAGATGGGATGGTAGATTATACTCGGTCCCCACGGTGGCGGCGCCGGTGATTCCTCCACCACCACCACCGCGACACCACGAACAATTCCAGCAAGTCAACTACAACAATTACCCCTTTCAGCAGCAGCAACAACAAGTACTTCAGTACCAGCGACAAGTACATCACCCCCACCACCAGCTCTATAGTGGAAGTCAAGGAAGCTATAATGAGCTGAATTTGGGATCTGGGTCATCGCTTTATTACCTGAGGACACCGTCAGCGTTGGCGGCTCCGGGAGATCGGAATTTAATGGAGCAGCGAGAGGGAGGAGGCGGCAATGTAAGTCCGATGATAATTGATTCGGTTCCAGTAGTTCATGGTAAGAGCATTTGTTCTACTAGTAGTGGTAGAATAATTGCTGATACTACAGCAAAGAAGCTTAGGCTATTTGGTGTGAACATGGAATGTTCTTCTTCTTCATCCAACACAATAGGACATCATGTCCCAATGGGTGATTCATCACTTTCCTCACCAAATCTTCAGTATTTGAGAGAATCGCATCATCATCATCATGAAGAAGAACAAGAAGAAGACCCATCACTTTCTTCATCATCATCAAGATTTGCAGATCAAAAGGGGAAAACTTCTGTCCTTTTTGATTTGAGCCCCTCCCTCCAATACCGACAGTAG 1491 0.4608 MELTQEAAKASSDYSREEDSREEEEDLLGETSNNKETSCKPYYPFSSSSNSSHPNLWLGMHHHQQQQSPEATTPCESHNSSSGLGLLHHHDTPSNSNSAIVNNNPNKKLDFMDLSLGNKKEEDEANNNNKAIEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGELYRHRLYIDWRRRPDYAAAADHLHHHHRHAAATITPLLLPNQYSIRWDGRLYSVPTVAAPVIPPPPPPRHHEQFQQVNYNNYPFQQQQQQVLQYQRQVHHPHHQLYSGSQGSYNELNLGSGSSLYYLRTPSALAAPGDRNLMEQREGGGGNVSPMIIDSVPVVHGKSICSTSSGRIIADTTAKKLRLFGVNMECSSSSSNTIGHHVPMGDSSLSSPNLQYLRESHHHHHEEEQEEDPSLSSSSSRFADQKGKTSVLFDLSPSLQYRQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00193 496 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 24 438 IPR044800 GO:0003700
Accr6g00193 496 Pfam B3 DNA binding domain 138 242 IPR003340 GO:0003677
Accr6g00193 496 SUPERFAMILY DNA-binding pseudobarrel domain 135 228 IPR015300 -
Accr6g00193 496 ProSiteProfiles B3 DNA-binding domain profile. 138 243 IPR003340 GO:0003677
Accr6g00193 496 MobiDBLite consensus disorder prediction 1 105 - -
Accr6g00193 496 SMART B3_2 138 243 IPR003340 GO:0003677
Accr6g00193 496 FunFam B3 domain-containing protein 131 252 - -
Accr6g00193 496 MobiDBLite consensus disorder prediction 468 482 - -
Accr6g00193 496 CDD B3_DNA 136 225 IPR003340 GO:0003677
Accr6g00193 496 Gene3D - 131 258 IPR015300 -
Accr6g00193 496 MobiDBLite consensus disorder prediction 452 467 - -
Accr6g00193 496 MobiDBLite consensus disorder prediction 32 105 - -
Accr6g00193 496 MobiDBLite consensus disorder prediction 452 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00193 Accr-Chr6 3174332 3175822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00193 113 426 RAV Transcription Factor Family AT2G46870 46.769 7.40e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr6g00193 B3 3.2e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00193 K09287 - gmx:100781424 355.525