Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00190 ATGGACGCATACTCCTCTGGAGGGGAAGTGATTGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCCTGGCAACGCATCGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCGCAGAAATTCTTTTCAAAGCTAGAGAAGGAGTCTCTTGAAAAGGGTGTTCCAATAGGACAAGCTCTTGACATAGACATCCCTCCTCCAAGGCCAAAAAGAAAGCCAGCTAATCCATATCCTCGGAAGATCAGTAATGGCTCTCCAGCATTACATAATGGAATAAAAGACGGAAAACTAACTTCTGTTTCACCTTCGCATGGTAAACATGCACTGGACTTGGAGAAAGAACCACCTCCAGAGGAATCTAATGGAGATGAAAGACCAAGTATTACTGAAAATAAGGATGAGAACTGCTCAGGAGTATTTGCTATCCCACAGGAGGCACCCTCTTCCTCTATATCTTCAGCAAAAAACAGATCAATTTCATTGTCAGTGCCACTGAGAAACTCATGCATATTAAGGGAGTTCACACCTTCAGTAAGAGTGGGAATTACTCGAGATGAAACAAATGAATCTTCCGTCACTATTGAACTTGAAAATCAGTGCAAGATAGATGGTGGAAGAAAACTACAAGAGACAAAAACCTCTAAATTGGAGGGTTCCAATGCTTCAGGTGTAAAATTGGTTCAAAGTCAGAATACAGATTATCTCAATTGTGCATTAACAAAAGATGGGATGCAAGACAATCAGAATTATCCAAGGCATGTCCCAGGGCATGGTATTGATGGGAACCAGGGAACAAGTACACAAAAGCCTCCCCAAGATATGCTACTACGAGAGACTATATTTCAGCCTGTGGGAGAGGTTAGTGCGCAACCTAGTATTTTCACAGGTTCAGCTGCATCAAACACAAGTGAAACTAGTTTTGCCGCTACATTTTGGCCCCACACAAATGCAGAAGCTTCAGCTGATTCTCCTGCTTCCTCTCTAGGAGGTTTCAAAACAAGACAAATTGGCTATCCTCCAAGTATGGAAGCTATTGCTGCTGCTACTGTGGCTGCTGCAACCGCATGGTGGACTGCCCATGGACTGCTTCCTTTGTGTGCTCCACTCCATTCTGCTTTCTCCTCTCCTCCTGCATCTGTGGTGGTAGTTCCTTCCATGAACACTGGCGAAGCACAAGCAGCTGAAAAAGATCAGAAAGAGACTACAGTTGAGAATCCTCCGCTGCAAGATCAGATGCCAAATGGAGAATATTCAGGAGCTTTGCAAGCTCAGCATTCAGACTCCACGTCACAAGCTGTTTGTTCATCAGATTCTAAGAGTGGAGATGCCAAGTTAACCACTTCACCTAAGGCTGCTGAACATGACAAGAACGAAGCAATGTCTGAGCACCTTGATTCCAACAAGACCAACGGAAGAAAACCGGTTGACCGTTCTTCATGTGGCTCCAACACAAATTCTAGTAGTGATATTGAGACAGATGCATTAGAGAAGAACGAGAAAGCGAAGGAAGAGTCCTTAACACCAGAAGCAAACCACTCAACAACTGACTCTAGTAATCGCCGAAATAGGAGTCCTGGCAACCTTACTGATTCTTGGAAAGAAGTCTCTGAAGAGGGGCGACAGGCCTTTCAGGCTCTCTTCTCCAGAGAGGTCTTGCCACAAAGCTTTTCACCACCACACTTGGAAAAGGACATTCAGAAAGACCACAAAAAGGAGTATCATGAGCAGAACACAGTTGAGAAATATGAAGACCTTGACAGCAACAAATACAGATCTGATCAGGTAGGGGTAGAGAAGAACATGCCATTTGTAGAAAACACACAAGAAGGGGAGGGACTTCTAACCATAGGGCTGGGACAAGGAAAGCTCAAGGCATGTCGAACCGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCCAAGGAAAATAGGGTTCGTGCTAGTAACCAGGGTGAAGAGGAAGGTCCCAAGAGAATACGCTTGGAGGGGGAGGCTTCAACTTGA 2085 0.4446 MDAYSSGGEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKESLEKGVPIGQALDIDIPPPRPKRKPANPYPRKISNGSPALHNGIKDGKLTSVSPSHGKHALDLEKEPPPEESNGDERPSITENKDENCSGVFAIPQEAPSSSISSAKNRSISLSVPLRNSCILREFTPSVRVGITRDETNESSVTIELENQCKIDGGRKLQETKTSKLEGSNASGVKLVQSQNTDYLNCALTKDGMQDNQNYPRHVPGHGIDGNQGTSTQKPPQDMLLRETIFQPVGEVSAQPSIFTGSAASNTSETSFAATFWPHTNAEASADSPASSLGGFKTRQIGYPPSMEAIAAATVAAATAWWTAHGLLPLCAPLHSAFSSPPASVVVVPSMNTGEAQAAEKDQKETTVENPPLQDQMPNGEYSGALQAQHSDSTSQAVCSSDSKSGDAKLTTSPKAAEHDKNEAMSEHLDSNKTNGRKPVDRSSCGSNTNSSSDIETDALEKNEKAKEESLTPEANHSTTDSSNRRNRSPGNLTDSWKEVSEEGRQAFQALFSREVLPQSFSPPHLEKDIQKDHKKEYHEQNTVEKYEDLDSNKYRSDQVGVEKNMPFVENTQEGEGLLTIGLGQGKLKACRTGFKPYKRCSVEAKENRVRASNQGEEEGPKRIRLEGEAST 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00190 694 MobiDBLite consensus disorder prediction 588 614 - -
Accr6g00190 694 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Accr6g00190 694 SMART sant 23 71 IPR001005 -
Accr6g00190 694 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Accr6g00190 694 MobiDBLite consensus disorder prediction 431 472 - -
Accr6g00190 694 MobiDBLite consensus disorder prediction 667 694 - -
Accr6g00190 694 MobiDBLite consensus disorder prediction 577 614 - -
Accr6g00190 694 MobiDBLite consensus disorder prediction 416 563 - -
Accr6g00190 694 PANTHER SWI/SNF COMPLEX-RELATED 9 578 - -
Accr6g00190 694 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Accr6g00190 694 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Accr6g00190 694 MobiDBLite consensus disorder prediction 519 536 - -
Accr6g00190 694 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Accr6g00190 694 CDD SANT 26 69 IPR001005 -
Accr6g00190 694 MobiDBLite consensus disorder prediction 475 499 - -
Accr6g00190 694 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Accr6g00190 694 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Accr6g00190 694 MobiDBLite consensus disorder prediction 133 158 - -
Accr6g00190 694 MobiDBLite consensus disorder prediction 537 558 - -
Accr6g00190 694 Gene3D - 26 73 - -
Accr6g00190 694 MobiDBLite consensus disorder prediction 500 518 - -
Accr6g00190 694 MobiDBLite consensus disorder prediction 84 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00190 Accr-Chr6 3112566 3120620 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr6g00190 Myb_DNA-binding 2.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00190 K12133 - gmx:100101859 815.068