Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00181 ATGCCTCTTCAAAACGAAGAGAGCAACCACAACAAACAGCTTTCACCAAAAATAGATGATGACGTTGTTGAAGAAGAAGCTGGCTTCTCCTATGCGATGCAGCTCGCCACTTCTACTGCGATTTCCATGGCGATGCAAACCGCAGTGGAGCTCGGCGTCTTTGACGTCATTCACAGAGCTGGTCATGACGCCAGGATCTCCGCCGCCGAGATCGCCACGGAGCTTTCTTGCAAGAACTCTGAAGCGCCTTCCGCCCTAGATCGTCTCCTTTGGCTCCTAGCGTCTCACACTGTTCTTTCCTGCTCTGTCGTCGCCAACGAGGATCAAGGGCCGAGGTGTTTCCGACGATTGTACGGCCTCTCTCCAGTGGCCAAATTCTTTGTGAAAAATGAGGATGGAGTGTCTTTGGGCCCTTTAATTGCATTGATTCAAGATAAGGTCTTCCTCGATAGCTGGCGCGAATTGAAGAATGCAATATGTGAAGGAGGAATAGCGTTCAATAGGGTACATGGATTGCATGCTTTTGAGTATCCGAGGTTGGATTCAAGGTTTAACGATGTGTTCAACAAGGCCATGGTGAATTCGACCACTTTGGTTGTGACCAGGATTCTTGAATCCTACAAAGGTTTTGAGGACAACACTAGACTCGTCGATGTTGGTGGAGGTCTCGGGATTACTCTCAGCTTGATCACTTCCAAATATCCTCATATTCAAGCCGTCAATTTCGACTTGCCTCATGTCATTCAACACGCTCCTCCTTATCCTAGAGTGGAACACGTGGGAGGAGATATGTTTGAAAGCGTGCCTCAAGGAGATGCAATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAATGGTGCGTGAAGCTATTGAAGAACTGTCATAAAGCCATTCCTGAAGAAGGAAAAGTGATTGTGGTGGAGGCAGTTTTGCCCATTGTTCCAGAGAATTCTGCTGCTGTAAAAAGCACTTCCCAACAGGATCTGATTATGATGACCCAAAACCCAGGTGGCAAAGAGAGAAGTGAGCAAGAGTTCATGGATTTGGCCACATCAGCTGGGTTTAGAGGCATTCGATATGAATGCTTTGTTTGTAACTTTTGGGTCATGGAATGGTTCAAATAG 1128 0.4672 MPLQNEESNHNKQLSPKIDDDVVEEEAGFSYAMQLATSTAISMAMQTAVELGVFDVIHRAGHDARISAAEIATELSCKNSEAPSALDRLLWLLASHTVLSCSVVANEDQGPRCFRRLYGLSPVAKFFVKNEDGVSLGPLIALIQDKVFLDSWRELKNAICEGGIAFNRVHGLHAFEYPRLDSRFNDVFNKAMVNSTTLVVTRILESYKGFEDNTRLVDVGGGLGITLSLITSKYPHIQAVNFDLPHVIQHAPPYPRVEHVGGDMFESVPQGDAIFMKWILHDWSDEWCVKLLKNCHKAIPEEGKVIVVEAVLPIVPENSAAVKSTSQQDLIMMTQNPGGKERSEQEFMDLATSAGFRGIRYECFVCNFWVMEWFK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00181 375 FunFam Caffeic acid O-methyltransferase 128 375 - -
Accr6g00181 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 373 IPR029063 -
Accr6g00181 375 Pfam O-methyltransferase domain 152 357 IPR001077 GO:0008171
Accr6g00181 375 PIRSF O-mtase 8 375 IPR016461 GO:0008168
Accr6g00181 375 CDD AdoMet_MTases 215 308 - -
Accr6g00181 375 Pfam Dimerisation domain 43 94 IPR012967 GO:0046983
Accr6g00181 375 SUPERFAMILY "Winged helix" DNA-binding domain 24 131 IPR036390 -
Accr6g00181 375 Gene3D - 8 127 IPR036388 -
Accr6g00181 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 375 IPR016461 GO:0008168
Accr6g00181 375 PANTHER O-METHYLTRANSFERASE 32 360 IPR016461 GO:0008168
Accr6g00181 375 Gene3D Vaccinia Virus protein VP39 128 375 IPR029063 -
Accr6g00181 375 FunFam Caffeic acid 3-O-methyltransferase 8 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00181 Accr-Chr6 2883316 2885748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00181 8 375 Monolignol Biosynthesis Gene Families AT5G54160 50.815 3.65e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00181 K13066 - qsa:O6P43_027445 511.916