Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00180 ATGGCTCAATCACAACAATCTTATTCACAGTCCATGCCTCTTCAAAACGAAGAGAGCAACCACAACAAACAGCTTTCACCAAAAATAGATGATGACGTTGTTGAAGAAGAAGCTGGCTTCTCCTATGCGATGCAGCTCGCCACTTCTACTGCGATTTCCATGGCGATGCAAACCGCAGTGGAGCTCGGCGTCTTTGACGTCATTCACAGAGCTGGTCATGACGCCAGGATCTCCGCCGCCGAGATCGCCACGGAGCTTTCTTGCAAGAACTCTGAAGCGCCTTCCGCCCTAGATCGTCTCCTTTGGCTCCTAGCGTCTCACACTGTTCTTTCCTGCTCTGTCGTCGCCAACGAGGATCAAGGGCCGAGGTGTTTCCGACGATTGTACGGCCTCTCTCCAGTGGCCAAATTCTTTGTGAAAAATGAGGATGGAGTGTCTTTGGGCCCTTTAATTGCATTGATTCAAGATAAGGTCTTCCTCGATAGCTGGCGCGAATTGAAGAATGCAATATGTGAAGGAGGAATAGCGTTCAATAGGGTACATGGATTGCATGCTTTTGAGTATCCGAGGTTGGATTCAAGGTTTAACGATGTGTTCAACAAGGCCATGGTGAATTCGACCACTTTGGTTGTGACCAGGATTCTTGAATCCTACAAAGGTTTTGAGGACAACACTAGACTCGTCGATGTTGGTGGAGGTCTCGGGATTACTCTCAGCTTGATCACTTCCAAATATCCTCATATTCAAGCCGTCAATTTCGACTTGCCTCATGTCATTCAACACGCTCCTCCTTATCCTAGAGTGGAACACGTGGGAGGAGATATGTTTGAAAGCGTGCCTCAAGGAGATGCAATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAATGGTGCGTGAAGCTATTGAAGAACTGTCATAAAGCCATTCCTGAAGAAGGAAAAGTGATTGTGGTGGAGGCAGTTTTGCCCATTGTTCCAGAGAATTCTGCTGCTGTAAAAAGCACTTCCCAACAGGATCTGATTATGATGACCCAAAACCCAGGTGGCAAAGAGAGAAGTGAGCAAGAGTTCATGGATTTGGCCACATCAGCTGGGTTTAGAGGCATTCGATATGAATGCTTTGTTTGTAACTTTTGGGTCATGGAATGGTTCAAATAG 1161 0.4651 MAQSQQSYSQSMPLQNEESNHNKQLSPKIDDDVVEEEAGFSYAMQLATSTAISMAMQTAVELGVFDVIHRAGHDARISAAEIATELSCKNSEAPSALDRLLWLLASHTVLSCSVVANEDQGPRCFRRLYGLSPVAKFFVKNEDGVSLGPLIALIQDKVFLDSWRELKNAICEGGIAFNRVHGLHAFEYPRLDSRFNDVFNKAMVNSTTLVVTRILESYKGFEDNTRLVDVGGGLGITLSLITSKYPHIQAVNFDLPHVIQHAPPYPRVEHVGGDMFESVPQGDAIFMKWILHDWSDEWCVKLLKNCHKAIPEEGKVIVVEAVLPIVPENSAAVKSTSQQDLIMMTQNPGGKERSEQEFMDLATSAGFRGIRYECFVCNFWVMEWFK 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00180 386 SUPERFAMILY "Winged helix" DNA-binding domain 35 142 IPR036390 -
Accr6g00180 386 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 44 386 IPR016461 GO:0008168
Accr6g00180 386 FunFam Caffeic acid 3-O-methyltransferase 19 138 - -
Accr6g00180 386 Gene3D - 19 138 IPR036388 -
Accr6g00180 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 143 384 IPR029063 -
Accr6g00180 386 MobiDBLite consensus disorder prediction 1 22 - -
Accr6g00180 386 PIRSF O-mtase 19 386 IPR016461 GO:0008168
Accr6g00180 386 Gene3D Vaccinia Virus protein VP39 139 386 IPR029063 -
Accr6g00180 386 Pfam O-methyltransferase domain 163 368 IPR001077 GO:0008171
Accr6g00180 386 MobiDBLite consensus disorder prediction 1 26 - -
Accr6g00180 386 Pfam Dimerisation domain 54 105 IPR012967 GO:0046983
Accr6g00180 386 PANTHER O-METHYLTRANSFERASE 43 371 IPR016461 GO:0008168
Accr6g00180 386 CDD AdoMet_MTases 226 319 - -
Accr6g00180 386 FunFam Caffeic acid O-methyltransferase 139 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00180 Accr-Chr6 2883316 2885781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00180 19 386 Monolignol Biosynthesis Gene Families AT5G54160 50.815 2.48e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00180 K13066 - qsa:O6P43_027445 511.916