Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00175 ATGGAACCTCAAATCTCTGAACACGCCCAAATTACTGAAGTCAGTGGTGATGTTCCTGAAGGAAGAAGTCCTGGAGGAACCAAGATCTGCGGGGAAGCACCCTGTGGATTTGCAGATGCTGGGTCCATCTCTAAGGATGCTAAAGAACGATCAACTTCGATGCGAAAGCTTTGGACTGCTGTGATCCTCTGTGTACTTTTCATGAGCGTTGAAGTAGTTGGTGGCATTAAAGCCAATAGTCTTGCAATTCTGACTGATGCAGCTCATTTGCTGTCCGATGTCGCAGCCTTTGCCATCTCCTTGTTCTCCTTATGGGCTGCTGGATGGGAAGCCACACCCCGCCAGTCATACGGATTTTTTAGAATAGAGATTCTTGGTGCCTTGGTTTCTATTCAACTAATATGGCTGCTCGCAGGGATTCTGGTATATGAAGCCATAGTAAGAATTATTGACGGTTCTCATAAGGTGAATGGCTTCTTAATGTTTTTGGTTGCAGCATTTGGTCTCGTGGTTAACATCATCATGGCTGTGTTATTGGGCCATGATCATGGCCATGGACATGATGATCATCATCATGGTTTAGGTCATGGCCACAACCATGGTCATGGGTTTACAGTGTCTACCCACCATGATCATCATCATCATCATAGTGGTGAGGATCACAAGCACCATCATGATGAAGAAGATCCCCATCATTCTCATGAGGATGATAAGCATCATCACCACGCTCATGACAGTGCTGCTGAGCCACTTCTTGATGGATCAAAAGACAAACCTGAAAAGAAGAGGCGATGGAATGTTAATGTACAAGGGGCGTATCTCCATGTTCTAGGGGACTCGATCCAAAGTGTCGGAGTTATGATTGGGGGAGCTATCATCTGGTACAAGCCTGAGTGGCAAATAGTTGATCTGATTTGCACTCTTATTTTCTCAGTAGTTGTTCTGTTTACAACAATAAATATGCTAAGAAACATACTCGAGGTTCTGATGGAGAGCACGCCGCGTGAGATTGACGCGACTAAGTTGGAAAGGGGTCTGTTAGATATGGATGAAGTAGTGGCAGTTCATGAACTGCACATATGGGCAATCACAGTGGGGAAGATTTTGTTGGCTTGCCATGTTAAAATCAGACCTGATGCAGATGCAGATTTGGTGCTCGTAAAGGTGGTTGAGTATATAAGAAGGGTTTATAACATCAGCCATGTAACTGTTCAAGTAGAGCGTTAG 1227 0.4466 MEPQISEHAQITEVSGDVPEGRSPGGTKICGEAPCGFADAGSISKDAKERSTSMRKLWTAVILCVLFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIVRIIDGSHKVNGFLMFLVAAFGLVVNIIMAVLLGHDHGHGHDDHHHGLGHGHNHGHGFTVSTHHDHHHHHSGEDHKHHHDEEDPHHSHEDDKHHHHAHDSAAEPLLDGSKDKPEKKRRWNVNVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWQIVDLICTLIFSVVVLFTTINMLRNILEVLMESTPREIDATKLERGLLDMDEVVAVHELHIWAITVGKILLACHVKIRPDADADLVLVKVVEYIRRVYNISHVTVQVER 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00175 408 Pfam Cation efflux family 57 330 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Accr6g00175 408 Gene3D Cation efflux protein transmembrane domain 53 329 IPR027469 -
Accr6g00175 408 MobiDBLite consensus disorder prediction 220 261 - -
Accr6g00175 408 SUPERFAMILY Cation efflux protein transmembrane domain-like 51 331 IPR027469 -
Accr6g00175 408 NCBIfam cation diffusion facilitator family transporter 54 408 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Accr6g00175 408 MobiDBLite consensus disorder prediction 186 261 - -
Accr6g00175 408 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 336 407 IPR036837 -
Accr6g00175 408 MobiDBLite consensus disorder prediction 1 25 - -
Accr6g00175 408 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 7 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00175 Accr-Chr6 2839443 2840669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00175 1 408 Inorganic Solute Cotransporters AT2G46800 72.263 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00175 K14689 - gmx:100794876 566.614