Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00171 ATGGGTGAAGTGGTCGTGCCGTCGGATGAACCGGGAATGGAAATGGAGGTCAGGTTGGAGACAGAGGAGGATCAGAGCAAGAAGATTGTACGCTGGGAGAATTTTTTGCCTCAGATGGTGCTTAGAGTATTACTTGTGGAAGCGGATGATTCTACTCGTCACGTTATCGCGGCCCTTCTCCGGAAATGCAGTTACAAAGTTGCTGCCGTTCCTGATGGATTAAAGGCATGGGAGACACTGAAGGGGAAAGCTTCTGAAATAGATCTCATATTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTTCTAACTTTGATCATGGAACATGATATATGCAAGAACATTCCTGTCATAATGATGTCTACACATGATTCAGTTAGTTTGTCAGTGAAATGCATCTTGAAAGGTGCAGCTGATTTTCTCATAAAACCTGTTCGGAGGAATGAGCTGAGGAACTTGTGGCAACATGTATGGAGAACACATGAGAAAAAACTGGAAACTACTCCTGAAAACAATGCTGCCAGCAATCAGTCTAGTGGTTCTGTGGCTTCCACACAGAAAAATAATGGACGACCTGAGAAAGGGAGTGAGGCCCAAAGCACTTGTACATCGCCATTTTCGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGGTACATCGCATCTGAAGAGTTCCTCGAATTTGAGCGACATTGAGAAGGTACAGAATGAAGACTCAACCATATTGAGTTTGGAAAAGCAATCAGTTGAGCTTAACAATGAAACTGGAGATAAGTCAGGGACATTGTTATCACCGGCCGCAAAGTGTGACAAGAATTTTAAATCGACAGATTTTGGGCAGGAGCAAGGACATGATTGTGCTGAAAAGGAGAATCAAGTTGAAGTTCTTAGAGCAGAGTCAAGCAGAGAAAATCATAACATGGATAGAGAGATTCATGAATGCAACAATGAACTGGTAGAACCCTGTAGAGGAGCTATTGATTTGATTGCTACATTCAAAAATCTACCAGTAAAGTATGATGAAAGGTGTAATCTCAGTGGTACTGGTGCAAAGAAGTTTGATTTTGATCCACGATTGGAGCTTTCTCTTAGACGTGATTTTCCTGGAAGCTCACCTAAACAAGCAATTGATGAAAAACTGGCCTTGAACCATTCAAAGGCTTCTGCCTTTTCTTGGTATAGCGGGTGCAAGTTTCCATCACCATCTGGAAGCTCTGCTAAAGCAGGTGGCCACAATGGGAATTCTCATGAAGCCAGTAAATTATCTATAAATACTGTTGACACTTCCCGTCAACATGGTGGCAGGAATCATAGCTTAGAGAATATGGCGACCCTTGCCATTGGTCAATCCGGTCAAGTTGAAATACAATTGACAAACAGCCAACTTGGACCATTTCCTGCTACGGGTGTTGCTTCTGATAACAAGCCTACTGTATCCGAATATGTTTTTCCACCTATGCTCCAAACACAATCTTATGTTCATTCCACATGGAGTCCAAAACCTAACTTCCCAAAAGAGAGTTCTCCTTCTCCCATTCTCGCGAGTAACTCTTTCCAGTCCAATCCTGAGGGTCACGAACAACGTTTTCACTGTTGTGATGATGCCACCTATACTTCTCGTGATAAAACTGCAAATGAAAAAAGCAATTTGGATCCTGCGACCCAACATTCTTCTGCTGTTGATCAGAGCACAAGCAATGCCTCTTGCCATGACACTGAAAATCAGAGCAGTAAGGATGATAATAATACCAGTGCCCATATACTCGCATGCAAGATTGATGGAAATGCTTCTTCGGCTGCAGTAGTTGAGAGCAACACTGAAAATTACGGGGACAGTGGCAATCATAATAAAGATGGATTTAGAGGGGCAGATTCTCATTGTCCTAGCCGCAGAGAAGCTGCTCTAACAAAGTTTCGGATGAAGAGAAAAGAGAGGTGCTATGAGCAAAAGGTCCGATATCTAAGCAGGAAAAGACTAGCAGAGCAGCGTCCGCGGGTTAAAGGGCAGTTTGTACGCCAAGTACATAACAACAATCATCCTGTTGCTGATGTTGATGGTGGTTCCTGA 2076 0.4311 MGEVVVPSDEPGMEMEVRLETEEDQSKKIVRWENFLPQMVLRVLLVEADDSTRHVIAALLRKCSYKVAAVPDGLKAWETLKGKASEIDLILTEVELPSISGFALLTLIMEHDICKNIPVIMMSTHDSVSLSVKCILKGAADFLIKPVRRNELRNLWQHVWRTHEKKLETTPENNAASNQSSGSVASTQKNNGRPEKGSEAQSTCTSPFSEAESAYMQNMQGTSHLKSSSNLSDIEKVQNEDSTILSLEKQSVELNNETGDKSGTLLSPAAKCDKNFKSTDFGQEQGHDCAEKENQVEVLRAESSRENHNMDREIHECNNELVEPCRGAIDLIATFKNLPVKYDERCNLSGTGAKKFDFDPRLELSLRRDFPGSSPKQAIDEKLALNHSKASAFSWYSGCKFPSPSGSSAKAGGHNGNSHEASKLSINTVDTSRQHGGRNHSLENMATLAIGQSGQVEIQLTNSQLGPFPATGVASDNKPTVSEYVFPPMLQTQSYVHSTWSPKPNFPKESSPSPILASNSFQSNPEGHEQRFHCCDDATYTSRDKTANEKSNLDPATQHSSAVDQSTSNASCHDTENQSSKDDNNTSAHILACKIDGNASSAAVVESNTENYGDSGNHNKDGFRGADSHCPSRREAALTKFRMKRKERCYEQKVRYLSRKRLAEQRPRVKGQFVRQVHNNNHPVADVDGGS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00171 691 Gene3D - 39 253 - -
Accr6g00171 691 MobiDBLite consensus disorder prediction 499 527 - -
Accr6g00171 691 PANTHER TWO-COMPONENT RESPONSE REGULATOR 41 327 IPR045279 GO:0009736
Accr6g00171 691 Coils Coil 289 320 - -
Accr6g00171 691 MobiDBLite consensus disorder prediction 171 208 - -
Accr6g00171 691 MobiDBLite consensus disorder prediction 499 530 - -
Accr6g00171 691 ProSiteProfiles CCT domain profile. 634 676 IPR010402 GO:0005515
Accr6g00171 691 CDD psREC_PRR 43 146 - -
Accr6g00171 691 SUPERFAMILY CheY-like 41 168 IPR011006 -
Accr6g00171 691 MobiDBLite consensus disorder prediction 545 585 - -
Accr6g00171 691 MobiDBLite consensus disorder prediction 551 585 - -
Accr6g00171 691 SMART REC_2 41 156 IPR001789 GO:0000160
Accr6g00171 691 MobiDBLite consensus disorder prediction 167 208 - -
Accr6g00171 691 MobiDBLite consensus disorder prediction 609 630 - -
Accr6g00171 691 ProSiteProfiles Response regulatory domain profile. 42 160 IPR001789 GO:0000160
Accr6g00171 691 Pfam CCT motif 634 676 IPR010402 GO:0005515
Accr6g00171 691 Pfam Response regulator receiver domain 43 154 IPR001789 GO:0000160
Accr6g00171 691 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00171 Accr-Chr6 2760203 2765217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00171 633 683 Response Regulator Gene Family AT5G24470 78.431 2.73e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr6g00171 Response_reg 7.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00171 K12130 - gmx:100779346 711.449