Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00170 ATGGGTGAAGTGGTCGTGCCGTCGGATGAACCGGGAATGGAAATGGAGGTCAGGTTGGAGACAGAGGAGGATCAGAGCAAGAAGATTGTACGCTGGGAGAATTTTTTGCCTCAGATGGTGCTTAGAGTATTACTTGTGGAAGCGGATGATTCTACTCGTCACGTTATCGCGGCCCTTCTCCGGAAATGCAGTTACAAAGTTGCTGCCGTTCCTGATGGATTAAAGGCATGGGAGACACTGAAGGGGAAAGCTTCTGAAATAGATCTCATATTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTTCTAACTTTGATCATGGAACATGATATATGCAAGAACATTCCTGTCATAATGATGTCTACACATGATTCAGTTAGTTTGTCAGTGAAATGCATCTTGAAAGGTGCAGCTGATTTTCTCATAAAACCTGTTCGGAGGAATGAGCTGAGGAACTTGTGGCAACATGTATGGAGAACACATGAGAAAAAACTGGAAACTACTCCTGAAAACAATGCTGCCAGCAATCAGTCTAGTGGTTCTGTGGCTTCCACACAGAAAAATAATGGACGACCTGAGAAAGGGAGTGAGGCCCAAGGTACATCGCATCTGAAGAGTTCCTCGAATTTGAGCGACATTGAGAAGGTACAGAATGAAGACTCAACCATATTGAGTTTGGAAAAGCAATCAGTTGAGCTTAACAATGAAACTGGAGATAAGTCAGGGACATTGTTATCACCGGCCGCAAAGTGTGACAAGAATTTTAAATCGACAGATTTTGGGCAGGAGCAAGGACATGATTGTGCTGAAAAGGAGAATCAAGTTGAAGTTCTTAGAGCAGAGTCAAGCAGAGAAAATCATAACATGGATAGAGAGATTCATGAATGCAACAATGAACTGGTAGAACCCTGTAGAGGAGCTATTGATTTGATTGCTACATTCAAAAATCTACCAGTAAAGTATGATGAAAGGTGTAATCTCAGTGGTACTGGTGCAAAGAAGTTTGATTTTGATCCACGATTGGAGCTTTCTCTTAGACGTGATTTTCCTGGAAGCTCACCTAAACAAGCAATTGATGAAAAACTGGCCTTGAACCATTCAAAGGCTTCTGCCTTTTCTTGGTATAGCGGGTGCAAGTTTCCATCACCATCTGGAAGCTCTGCTAAAGCAGGTGGCCACAATGGGAATTCTCATGAAGCCAGTAAATTATCTATAAATACTGTTGACACTTCCCGTCAACATGGTGGCAGGAATCATAGCTTAGAGAATATGGCGACCCTTGCCATTGGTCAATCCGGTCAAGTTGAAATACAATTGACAAACAGCCAACTTGGACCATTTCCTGCTACGGGTGTTGCTTCTGATAACAAGCCTACTGTATCCGAATATGTTTTTCCACCTATGCTCCAAACACAATCTTATGTTCATTCCACATGGAGTCCAAAACCTAACTTCCCAAAAGAGAGTTCTCCTTCTCCCATTCTCGCGAGTAACTCTTTCCAGTCCAATCCTGAGGGTCACGAACAACGTTTTCACTGTTGTGATGATGCCACCTATACTTCTCGTGATAAAACTGCAAATGAAAAAAGCAATTTGGATCCTGCGACCCAACATTCTTCTGCTGTTGATCAGAGCACAAGCAATGCCTCTTGCCATGACACTGAAAATCAGAGCAGTAAGGATGATAATAATACCAGTGCCCATATACTCGCATGCAAGATTGATGGAAATGCTTCTTCGGCTGCAGTAGTTGAGAGCAACACTGAAAATTACGGGGACAGTGGCAATCATAATAAAGATGGATTTAGAGGGGCAGATTCTCATTGTCCTAGCCGCAGAGAAGCTGCTCTAACAAAGTTTCGGATGAAGAGAAAAGAGAGGTGCTATGAGCAAAAGGTCCGATATCTAAGCAGGAAAAGACTAGCAGAGCAGCGTCCGCGGGTTAAAGGGCAGTTTGTACGCCAAGTACATAACAACAATCATCCTGTTGCTGATGTTGATGGTGGTTCCTGA 2019 0.4309 MGEVVVPSDEPGMEMEVRLETEEDQSKKIVRWENFLPQMVLRVLLVEADDSTRHVIAALLRKCSYKVAAVPDGLKAWETLKGKASEIDLILTEVELPSISGFALLTLIMEHDICKNIPVIMMSTHDSVSLSVKCILKGAADFLIKPVRRNELRNLWQHVWRTHEKKLETTPENNAASNQSSGSVASTQKNNGRPEKGSEAQGTSHLKSSSNLSDIEKVQNEDSTILSLEKQSVELNNETGDKSGTLLSPAAKCDKNFKSTDFGQEQGHDCAEKENQVEVLRAESSRENHNMDREIHECNNELVEPCRGAIDLIATFKNLPVKYDERCNLSGTGAKKFDFDPRLELSLRRDFPGSSPKQAIDEKLALNHSKASAFSWYSGCKFPSPSGSSAKAGGHNGNSHEASKLSINTVDTSRQHGGRNHSLENMATLAIGQSGQVEIQLTNSQLGPFPATGVASDNKPTVSEYVFPPMLQTQSYVHSTWSPKPNFPKESSPSPILASNSFQSNPEGHEQRFHCCDDATYTSRDKTANEKSNLDPATQHSSAVDQSTSNASCHDTENQSSKDDNNTSAHILACKIDGNASSAAVVESNTENYGDSGNHNKDGFRGADSHCPSRREAALTKFRMKRKERCYEQKVRYLSRKRLAEQRPRVKGQFVRQVHNNNHPVADVDGGS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00170 672 MobiDBLite consensus disorder prediction 171 215 - -
Accr6g00170 672 MobiDBLite consensus disorder prediction 480 511 - -
Accr6g00170 672 Coils Coil 218 238 - -
Accr6g00170 672 Pfam Response regulator receiver domain 43 154 IPR001789 GO:0000160
Accr6g00170 672 MobiDBLite consensus disorder prediction 526 566 - -
Accr6g00170 672 MobiDBLite consensus disorder prediction 532 566 - -
Accr6g00170 672 CDD psREC_PRR 43 146 - -
Accr6g00170 672 Coils Coil 270 301 - -
Accr6g00170 672 Pfam CCT motif 615 657 IPR010402 GO:0005515
Accr6g00170 672 SMART REC_2 41 156 IPR001789 GO:0000160
Accr6g00170 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 41 328 IPR045279 GO:0009736
Accr6g00170 672 MobiDBLite consensus disorder prediction 480 508 - -
Accr6g00170 672 SUPERFAMILY CheY-like 41 168 IPR011006 -
Accr6g00170 672 ProSiteProfiles Response regulatory domain profile. 42 160 IPR001789 GO:0000160
Accr6g00170 672 MobiDBLite consensus disorder prediction 590 612 - -
Accr6g00170 672 MobiDBLite consensus disorder prediction 167 215 - -
Accr6g00170 672 Gene3D - 39 255 - -
Accr6g00170 672 ProSiteProfiles CCT domain profile. 615 657 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00170 Accr-Chr6 2760203 2765217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00170 614 664 Response Regulator Gene Family AT5G24470 78.431 2.67e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr6g00170 Response_reg 7.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00170 K12130 - gmx:100779346 670.618