Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00158 ATGGGGAAGAAAAAAGGAGGTAGCTCATGGTTGAGTGCCGTCAAAAGAGCCTTCAGATCTCCAACCAAAGACCAAATCGACGAAGACAAGAAAAGAGAAAAACGAAGATGGATCTTCAGAAAATCGATAATAAACCACGAATCACCGAGTTCCCAACAAACCCCAGCAGAGGAGAAGCCTGATGCGGCCGAGGCAGCCACAGATCAAAAGCACGCGCTGGCTGTGGCGGTTGCTGCCGCTGAGGTGGCCATGGCCACAGCTCAGGCGGCTGTGGAAGTGGCTAGACTTACTAGACCACCTAGTCATACCAAGGAGCACTATGCAGCTATTGTGATTCAAACTGCTTTCAGAGGATACTTAGCAAGAAGGGCTCTTCGAGCTTTGAAGGGGCTGGTAAAATTGCAAGCATTAGTAAGAGGTCACAATGTTCGGAAGCAAGCGAAGATGACACTTCGGTGCATGCAGGCTCTGGTCAGAGTTCAAGCTCGGGTGGTTGATCAGCGCGTGAGGTTGTCACATGATGGAAGCAGTAGAAAATCAACGTTTAGTGACACAAATAGCCTCTTTGAATCGCGTTATCTTCAGGACATTTCAGATAGAAGATCAATGTCAAGAGAAGGAAGCAGTATTGCAGATGATTGGGATGAAAGGCCACACACGGTTGAAGAAATTAAAGCTATGTTGAGACAGAGGAAGGAGGCTGCTTTGAAGCGAGACAAGTCCTTGTCTCAAGCTTTCTCTCAACAGGTCTGGAGAACCGGAAGACGGCCGTCAATTGGGAATGAAGAGGAGCTGGAGGAGAGGCCGGCGTGGTTCGAGCGGTGGATGGTGGCGAAGCCGTGGGAGATGAGGGGAAGATCATCGGTTGATCATCAAAGAGACACTATCAAAACAGTAGAAATGGATACATCTCGTCCTCACTCATCATATTTAGGATCTAACTTCAGAAAATCACACCCAAATTACCAATATAACCCACACCAACATCAGCCTCAAAGACACTCTGTAGCATCTCCATTCCACCAAAATGCGTCGTCCTCGTCATCTCTTTACCATTCCCCTGCAACCCCGTCTCCTGCGAAATCCCGGCCAATCCAAGTACGGTCAGCGAGCCCTCGCTGTGCCAGGGAAGATAGAAGCTTCCATAGCACATCTCGAACGCCAAGCTTGAGGTCCAACTATCATTACACAGGAAGCTTGTACCAATGTGGAAGAGGTGGTGGAAGCAGCAACAATGGAGGCGCTTCGTTGCCTAATTACATGGCGGCGACCGAGTCTGCCAAGGCGAGGGTCCGGTCTCTGAGCGCGCCGAGGCAAAGGCATTCAACATCAGAGAGAGACAGAGTTGGATCAGCAAAGAAGAGGCTTTCTTTCCCTGCTCATCCTCCTGGAGATGCCTATGCTTATGGCGGTTATAGCAGTTATGGTAGTTATGGACATAGTCTGAGGAGTCCAAGCTTCAAGAGTGTGCGTGGATCACATTATGGGATGGATCAAGTTTCCATATATTCTTCTTGCTGCACAGAGAGCCTTGCTACTGCTGCTGACATGTCTCCTTCAGATGTTGATCTTAGAAGGTAG 1581 0.4908 MGKKKGGSSWLSAVKRAFRSPTKDQIDEDKKREKRRWIFRKSIINHESPSSQQTPAEEKPDAAEAATDQKHALAVAVAAAEVAMATAQAAVEVARLTRPPSHTKEHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVVDQRVRLSHDGSSRKSTFSDTNSLFESRYLQDISDRRSMSREGSSIADDWDERPHTVEEIKAMLRQRKEAALKRDKSLSQAFSQQVWRTGRRPSIGNEEELEERPAWFERWMVAKPWEMRGRSSVDHQRDTIKTVEMDTSRPHSSYLGSNFRKSHPNYQYNPHQHQPQRHSVASPFHQNASSSSSLYHSPATPSPAKSRPIQVRSASPRCAREDRSFHSTSRTPSLRSNYHYTGSLYQCGRGGGSSNNGGASLPNYMAATESAKARVRSLSAPRQRHSTSERDRVGSAKKRLSFPAHPPGDAYAYGGYSSYGSYGHSLRSPSFKSVRGSHYGMDQVSIYSSCCTESLATAADMSPSDVDLRR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00158 526 MobiDBLite consensus disorder prediction 431 457 - -
Accr6g00158 526 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Accr6g00158 526 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Accr6g00158 526 FunFam IQ-domain 11 104 155 - -
Accr6g00158 526 MobiDBLite consensus disorder prediction 20 35 - -
Accr6g00158 526 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Accr6g00158 526 Pfam IQ calmodulin-binding motif 132 148 IPR000048 GO:0005515
Accr6g00158 526 MobiDBLite consensus disorder prediction 439 454 - -
Accr6g00158 526 SMART iq_5 127 148 IPR000048 GO:0005515
Accr6g00158 526 SMART iq_5 104 126 IPR000048 GO:0005515
Accr6g00158 526 MobiDBLite consensus disorder prediction 284 394 - -
Accr6g00158 526 MobiDBLite consensus disorder prediction 302 365 - -
Accr6g00158 526 Pfam Protein of unknown function (DUF4005) 371 484 IPR025064 -
Accr6g00158 526 MobiDBLite consensus disorder prediction 284 301 - -
Accr6g00158 526 Gene3D - 102 157 - -
Accr6g00158 526 PANTHER IQ-DOMAIN 5-RELATED 1 460 - -
Accr6g00158 526 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00158 Accr-Chr6 2644868 2647414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00158 10 526 IQD Protein Family AT4G00820 53.584 1.45e-164 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00158 - - pcin:129288632 835.099