Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00153 ATGAGCATGAATGCCGCGAAATCTCGTACCTGCGTCGGAAAATACGAGCTGGGTAAAACCATTGGCGAGGGTAGCTTCGCCAAGGTGAAGTTTGCGAGAAACGTTGAGACAGGGCAGCACGTCGCCATCAAAATCCTCGACCGTAACCATGTTCTTCGACACAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACCATGAAGCTGATCAAGCATCCGAATGTTGTCAATATATTTGAGGTGATGGCAAGTAAAACAAAGATTTACATTGTCCTGGAGTTTGTTAAAGGGGGAGAACTCTTTGACAAAATAGCTAATGATGGGAAGCTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAACTTATTAATGCTGTTGATTACTGCCATAGTAGAGGTGTCTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACACAAATGGTATTCTTAAAGTTTCAGATTTTGGACTGAGTACCTACTCACAGCAAGATGATGCACTGCTACGCACTGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTAATGCTAATACTAAAGGCTATGATGGTTCAGCAGCTGATATTTGGTCTTGCGGCGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAACCAAGTCAAATGGTTTTGTATAAGAAAATTTGCAAGGCTGAATTCTCATACCCATCATGGTTTCCACCAGATGCAAAGAAACTGCTTTGTCGTATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTTGGGAAATCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAGGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCCAAGGAAAACCTTGTCACAGAAAGGAAAGAAAAACCTGTCTCCATGAATGCTTTTGAGCTCATTTCGAGGTCAGAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGAGAAGGGCATTGTGAAGCGAGAAACACGATTTACTTCTCAGCGCCCAGCTCAGGAAATTATATCTAAAATTGAGGAAGCTGCCAAACCACTGGGATTTAATGTCCACCGGCGTAACTACAAGATGAAGCTCCAAGGCGACAAGAGTGGAAGGAAGGGACACCTCTCTGTCGCTACTGAGGTTTTTGAAGTGGCTCCCTCATTGCACATGGTGGAGTTGCGGAAGACTGGGGGTGACACACTGGAGTTTCACAAGTTCTACAAAAAGTTTTCATCAGGTTTGCAAGATGTAGTATGGCACCCTGAAGGAAAAAGCGAAGAAAAACTTGAACAATCAAGGTAG 1338 0.4283 MSMNAAKSRTCVGKYELGKTIGEGSFAKVKFARNVETGQHVAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVKGGELFDKIANDGKLKENEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDTNGILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLNANTKGYDGSAADIWSCGVILFVLMAGYLPFDEPSQMVLYKKICKAEFSYPSWFPPDAKKLLCRILDPNPLTRIKIWEILEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSESFNLDSLFEKEKGIVKRETRFTSQRPAQEIISKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKKFSSGLQDVVWHPEGKSEEKLEQSR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00153 445 FunFam Non-specific serine/threonine protein kinase 8 310 - -
Accr6g00153 445 Gene3D Transferase(Phosphotransferase) domain 1 95 295 - -
Accr6g00153 445 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Accr6g00153 445 Pfam NAF domain 309 368 IPR004041 GO:0007165
Accr6g00153 445 FunFam Non-specific serine/threonine protein kinase 306 432 - -
Accr6g00153 445 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Accr6g00153 445 Gene3D Kinase associated domain 1, KA1 306 432 - -
Accr6g00153 445 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Accr6g00153 445 CDD CIPK_C 313 426 - -
Accr6g00153 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Accr6g00153 445 SUPERFAMILY Protein kinase-like (PK-like) 12 281 IPR011009 -
Accr6g00153 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 417 - -
Accr6g00153 445 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Accr6g00153 445 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00153 445 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00153 445 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00153 Accr-Chr6 2589278 2594421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00153 8 440 CBL-interacting serine-threonine protein kinases AT1G01140 74.545 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr6g00153 Pkinase 2.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00153 - - pcin:129288537 833.558