Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00146 ATGGTGGGAAGTGGAAAAGGGAGCTTTAAAATGAAAGAACTTGGGATCATGACAAATCATGAAACTGATAATAACAGTGAGGAAGAACAGAGAAAAGGAGTAAGAAGAGGGTGTTTGGCGATTAAGGTAGGAAGAGAAGAGCAAGAGAGAATAGTGGTGCCGGTGAGTTACTTGAATCATCCTCTGTTTGCAGAGTTGCTGAAGGAGGCAGAGGAAGAGTACGGATTTGAGCAAGAAGGAGCCATAGCCATACCTTGCCAGTTGAAGCATTTCAAGTACGTTGAAGCCATCATTCACAGGGAACAGTTGCATCATCATCATCATCATCGCCTTGTTATTGGATGCTTCAGGCTTTGA 357 0.4342 MVGSGKGSFKMKELGIMTNHETDNNSEEEQRKGVRRGCLAIKVGREEQERIVVPVSYLNHPLFAELLKEAEEEYGFEQEGAIAIPCQLKHFKYVEAIIHREQLHHHHHHRLVIGCFRL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00146 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 93 IPR003676 GO:0009733
Accr6g00146 118 Pfam Auxin responsive protein 25 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00146 Accr-Chr6 2489657 2490013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00146 2 94 Calmodulin-binding Proteins AT5G20810 39.604 5.12e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00146 K14488 - cave:132187600 107.071