Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00135 ATGGGAAGAGCTCCTTGCTGTGCAAAAGTTGGGCTTCACAGAGGTCCATGGACTCTTAAAGAAGACGCATTGCTCACCAAGTATATCCAAGCTCATGGCGAAGGTCAATGGAGATCCTTGCCTAAACGAGCTGGGCTTTTGAGGTGTGGAAAAAGTTGCAGGCTGAGGTGGATGAACTATCTGAGACCAGACATAAAGAGGGGAAACATAACACCGGAAGAGGACGATCTCATAATCCGAATGCACTCTCTTCTCGGCAATCGATGGTCTCTCATTGCAGGAAGATTACCTGGAAGAACAGATAATGAAATCAAGAACCACTGGAACACACATCTCAGCAAGAGGCTAAGGAACCAAGGAACCGACCCATCCACTCACAAGAAGCTCTCTTCTTTGCCGTCATCCCTACCGAATTCTCGGACGAAGAAGGCGAACAAGAAGAAGAAGAAAGGCAAGGCGCGTGACAATAATGGAGTAGCAGCAGAGAAAGATGAAGAGAAGAAGACAATAGTGTATCTTCCGAAGCCGGTCAGAGTCACGGCTTGTATTTCTTCTCCAATTCCCAGAAGTGATAGTAACAAGAACTTGAACTCGTTCGATTCCAACTCAGCGAGTGGATCTACAAGCCAAGAGAAGGAGGAAGGGAAGGTTCCTTGGGGAGAAAATTATAATTATAACAACAATAATAACAATAACTTTACTTATGTTGACGAAAATGATCATGAGTTTGTGGGGTTGCTTGAGGAGGACAATGACTTGGTCAACGGGTCCGACATGGAGGGGCAATCGGAGTTTCCGACGTCGGCCGAGCAACATGGGACGCTGGAGAAGCTATACGAGGAATACTTCCAGCTCTTGAATAACCAACAAAACCAAGATGAGTTGGAGTCTTTTGCTGAATCCTTGCTTGTTTGA 915 0.459 MGRAPCCAKVGLHRGPWTLKEDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNHWNTHLSKRLRNQGTDPSTHKKLSSLPSSLPNSRTKKANKKKKKGKARDNNGVAAEKDEEKKTIVYLPKPVRVTACISSPIPRSDSNKNLNSFDSNSASGSTSQEKEEGKVPWGENYNYNNNNNNNFTYVDENDHEFVGLLEEDNDLVNGSDMEGQSEFPTSAEQHGTLEKLYEEYFQLLNNQQNQDELESFAESLLV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00135 304 Gene3D - 69 131 - -
Accr6g00135 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr6g00135 304 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr6g00135 304 MobiDBLite consensus disorder prediction 114 140 - -
Accr6g00135 304 CDD SANT 16 61 IPR001005 -
Accr6g00135 304 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr6g00135 304 MobiDBLite consensus disorder prediction 184 222 - -
Accr6g00135 304 FunFam MYB transcription factor 68 129 - -
Accr6g00135 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr6g00135 304 MobiDBLite consensus disorder prediction 185 212 - -
Accr6g00135 304 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 231 - -
Accr6g00135 304 SMART sant 66 114 IPR001005 -
Accr6g00135 304 SMART sant 13 63 IPR001005 -
Accr6g00135 304 CDD SANT 71 112 IPR001005 -
Accr6g00135 304 FunFam Myb transcription factor 11 67 - -
Accr6g00135 304 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr6g00135 304 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr6g00135 304 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr6g00135 304 Gene3D - 14 66 - -
Accr6g00135 304 MobiDBLite consensus disorder prediction 114 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00135 Accr-Chr6 2201780 2203035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00135 4 131 MYB Transcription Factor Family AT3G13540 71.875 3.43e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr6g00135 Myb_DNA-binding 5.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00135 K09422 - gmx:778044 346.28