Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00131 ATGGAAGCGAAACCCCACCAACCATGCGCAGCTTGCAGGATGCTTCGCCGGAGATGTGACACCAAGTGCCTTCTCTCCCCATACTTCCCGGCTGACGAGCTCGACAAGTTCGCCGTAGTCCACCGAGTCTTCGGCGCCAGCAACGTTATCAAAATGATTCAGATGGTGGAGGAGACGAAGAGGGAGGATGCAGTGAAAGCGATAGTGTACGAGGCAATGGCGAGGGTGAGGGATCCGGTGTATGGCAGTGCAGGGGCTATCCAGCAGCTGCAGAACATGGTTCAGCAGCTCAAGTTCGAGGTGGAAACCATGAAGGCTAGGGTTTCAGAGGTGCAACAACAAACAGACCAGTTGCTTATCAATATCAACACTCATACACATCATCTTCATCATAATATTGATAATCCTATTCCTCATCATCAGTTTCCCATCAATAATAATGTCCAAGACCCTTTCTTTGATGACTATTACGCTTCCTTTTCATCCGACCCAATGGATCAATTTCCTCTGCAAGCCGACTGGGTCTTGTAA 531 0.4915 MEAKPHQPCAACRMLRRRCDTKCLLSPYFPADELDKFAVVHRVFGASNVIKMIQMVEETKREDAVKAIVYEAMARVRDPVYGSAGAIQQLQNMVQQLKFEVETMKARVSEVQQQTDQLLININTHTHHLHHNIDNPIPHHQFPINNNVQDPFFDDYYASFSSDPMDQFPLQADWVL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00131 176 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Accr6g00131 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 125 - -
Accr6g00131 176 Coils Coil 87 114 - -
Accr6g00131 176 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00131 Accr-Chr6 2128897 2129536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00131 1 128 AS2 family AT2G30130 48.438 2.78e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr6g00131 LOB 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00131 - - ccaj:109796546 193.356