Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00124 ATGGAGCCAACACCTCCCTGCACCCGCGACGATGACCTAACAGCCGCCGTCTCCTCCGCCACCATTCAGCCTGTTGACAAATCTGATAACTCAAGAGTCGGAGGCACGCGCCACCCAGTCTACAGGGGCGTCCGTAAGCGGCGCTGGGGCAAATGGGTGTCCGAAATCCGGGAGCCACGGAAGAAATCGCGAATATGGCTGGGGTCATTTCCCGTGCCGGAGATGGCGGCGAAGGCATATGACGTGGCGGCGTACTGCCTGAAAGGCAGGAAGGCTCAGCTCAATTTCCCCGACGAGGTCGAGCTCTTGCCGCGGCCGTCCACGTGTGCCGCCAGAGATATTCAGGAGGCGGCGGCTAAGGCAGCTCATGCAATGAAAGCCTCCGTGAAGAAGAATAGCATTATGTCTGACGGCGACGGCGACATTGGGGGAGATGATTTTTGGGGCGAGATTGAATTACCAGAGCTGATGAACAGCGGGTGTTTCTGGAGTTCTCCAAGTGGGTCATCGTGGGCTACTTCCGGCGACATCACGTCCTGGCCGGAAATGGAGCTTCCGTCGCAGCAGCAACCGTTCATGGCGTGCTTATAA 591 0.5838 MEPTPPCTRDDDLTAAVSSATIQPVDKSDNSRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVELLPRPSTCAARDIQEAAAKAAHAMKASVKKNSIMSDGDGDIGGDDFWGEIELPELMNSGCFWSSPSGSSWATSGDITSWPEMELPSQQQPFMACL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00124 196 Pfam AP2 domain 39 89 IPR001471 GO:0003700|GO:0006355
Accr6g00124 196 CDD AP2 41 98 IPR001471 GO:0003700|GO:0006355
Accr6g00124 196 MobiDBLite consensus disorder prediction 1 38 - -
Accr6g00124 196 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Accr6g00124 196 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Accr6g00124 196 FunFam Ethylene-responsive transcription factor 2 39 98 - -
Accr6g00124 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 27 132 - -
Accr6g00124 196 MobiDBLite consensus disorder prediction 14 30 - -
Accr6g00124 196 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Accr6g00124 196 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Accr6g00124 196 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700|GO:0006355
Accr6g00124 196 SUPERFAMILY DNA-binding domain 40 99 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00124 Accr-Chr6 2005243 2005833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00124 4 196 AP2-EREBP Transcription Factor Family AT1G01250 56.931 4.74e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr6g00124 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00124 K09286 - qsa:O6P43_017799 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00124 6 2005243 2005833 Accr6g00124 6 2005243 2005833 ECH