Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00107 ATGGATGCCAGGTCAGAAAAAGTTGTGAGGTTTAAGGACTGGACTACAGAATCATCTTTCAATGCTGAGAAAATAATTTCTTCTGATGATGGATATCCTCAGAGAAAAGTTAGAACAAGACCAAGAGATGTGTTTAACAATATCAGAAGAGGAATCCAAAGAAGGTTTGAGAAGATTAAAGACTTGAGAAAACCTGCAAATGTGCATCCAGTAAGCGATGCAACTCCCAAGATATCGGCTTCGAAGACGAAGATTCTTGATCCACAGGGGTCTTTCCTTCAGAAATGGAACAAAATATTTGTGATAGCATGTGTACTAGCAGTATCTGTGGATCCTCTGTTCTTTTACATCCCGGTTATTAATGGCAGCAAAAAATGCCTTTGTTTGGACAAACGATTGCAGATTATTGCCAGTGTTCTTCGTACATTCTTTGACCTTTTCTACATTCTGCACATGGCATTTAAGTTTCGAACGGGTTTTATCGCCCCTTCTTCTCGAGTTTTTGGTAGGGGAGAGCGCATTGATGATCCTCAGGCTATTGCAAAAAGATACTTATCTTCATACTTCATCATTGACATCCTATCAATTATTCCACTTCCACAGGCGTTTTTGGCAGTGAGACATTCAGTTACATCTAAAGAAAAGGACTGGTTAAAATATGCAATATTTATCCAATATGTCCCCAGATTTCTTCGGATCTATCCATTATTCACCGAAGTAACTAGAACTTCTGGAATACTGACTGAGACAGCTTGGGCTGGTGCTGCTTATAATCTCTTTCTCTATATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTACCTTTTTTCAGTAGAATCAGAGCTTCGGTGCTGGCGCAGAGAATTGAGGAATGCTAGTTTTCCTACAGACATAAACTGTAACCAGATAAATTCAAGTGTCACAACACTTCTCAATAATTCTTGTTCCTTCAAGGATCCTGACCAAATTGACGACCCCAAAGTCTTCAATTTTGGAATATATATCGACGCTTTAGAAAATCATGTCGTGGAATCAACCATGGATTTCCCTCAAAAGATCTTCTTCTGCTTTTGGTGGGGTCTGCGCAATGTAAGTTCTCTAGGACAAAATCTCAAGACAAGTACATACGTTGGGGAGATCATCTTTGCTTGCTTCATTGCAATCTTTGGGTTGGTTTTGTTCTCATTACTCATCGGAAACATGCAGAAATATCTACAATCTGTAACTGTTAGAGTTGAAGAAATGAGAATCAAGAGGAGGGATGCAGAGCGGTGGATGTCCCACCGTATGCTACCAGAGCACTTGAGGGAAAGAATCAGACGCTATGAGCATTACAAGTGGCAAGAAAACAGAGGTGTGGATGAAGAAACATTAATCTGCAATCTTCCTAAAGATCTCAGAAGAGACATAAAGCGTCACCTTTGCTTGGATTTACTTAAAAAAGTGCCAATGTTCGAGACAATGGATGGGCAGTTGTTGGATGCGCTTTGTGATGGGCTGAAGCCAGTACTTTATACAGAGAAGAGCGCGATTATTCGCGAAGGAGATCCGGTGGATCAAATGCTATTCATTATGCGAGGAAACCTTGCAACTACGACAACAAATGGTGGAAGAACAGGTTTTTTCAACTCTTTTGTTATCAAGGCGGGTGATTTCTGTGGAGAGGAGCTTTTAACATGGGCCTTGGACCCCAACTCGTCCTCAAATCTTCCCATTTCAACCAGAACTGTAGAATCTCTGTCAGAAGTTGAAGCCTTCGCTCTCATGGCTAATGACTTGAAGCATGTTGCTTCCCAATTTCGACGCCTTCACAACAAATACATCCAGCACACTTTCAGGTACTATTCCTTGCAATGGAGGACATGGGCTGCATGTTTCATACAAGCAGCTTGGCGTCGCCACTGTAAAAGGAAGATTGAGAAATCTTTACGTGAAGCGGAAGACAGGCTGCAAGATGCTTTGGCAAAAGAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACTATATATGCAGCACGGTTTGCTGCCAATGCGTTACGCGGCCTAAGAAAAATTAAGGGGGAACGAAAGAACAACAGAATGTCTCAGAGGTTGCTTCCTCTGCTGCCTCAGAAGCCAACTGAACCTGATTTCACCACACAAGCTTAG 2145 0.4182 MDARSEKVVRFKDWTTESSFNAEKIISSDDGYPQRKVRTRPRDVFNNIRRGIQRRFEKIKDLRKPANVHPVSDATPKISASKTKILDPQGSFLQKWNKIFVIACVLAVSVDPLFFYIPVINGSKKCLCLDKRLQIIASVLRTFFDLFYILHMAFKFRTGFIAPSSRVFGRGERIDDPQAIAKRYLSSYFIIDILSIIPLPQAFLAVRHSVTSKEKDWLKYAIFIQYVPRFLRIYPLFTEVTRTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSVESELRCWRRELRNASFPTDINCNQINSSVTTLLNNSCSFKDPDQIDDPKVFNFGIYIDALENHVVESTMDFPQKIFFCFWWGLRNVSSLGQNLKTSTYVGEIIFACFIAIFGLVLFSLLIGNMQKYLQSVTVRVEEMRIKRRDAERWMSHRMLPEHLRERIRRYEHYKWQENRGVDEETLICNLPKDLRRDIKRHLCLDLLKKVPMFETMDGQLLDALCDGLKPVLYTEKSAIIREGDPVDQMLFIMRGNLATTTTNGGRTGFFNSFVIKAGDFCGEELLTWALDPNSSSNLPISTRTVESLSEVEAFALMANDLKHVASQFRRLHNKYIQHTFRYYSLQWRTWAACFIQAAWRRHCKRKIEKSLREAEDRLQDALAKEEGSSVSFGATIYAARFAANALRGLRKIKGERKNNRMSQRLLPLLPQKPTEPDFTTQA 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00107 714 Coils Coil 636 656 - -
Accr6g00107 714 CDD CAP_ED 484 615 IPR000595 -
Accr6g00107 714 SUPERFAMILY cAMP-binding domain-like 413 610 IPR018490 -
Accr6g00107 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 73 710 - -
Accr6g00107 714 FunFam Cyclic nucleotide-gated ion channel 1 411 475 - -
Accr6g00107 714 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Accr6g00107 714 ProSiteProfiles cAMP/cGMP binding motif profile. 484 568 IPR000595 -
Accr6g00107 714 Gene3D Helix hairpin bin 411 475 - -
Accr6g00107 714 Gene3D - 98 410 - -
Accr6g00107 714 Pfam Ion transport protein 96 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr6g00107 714 Gene3D Jelly Rolls 482 602 IPR014710 -
Accr6g00107 714 ProSiteProfiles IQ motif profile. 620 649 IPR000048 GO:0005515
Accr6g00107 714 MobiDBLite consensus disorder prediction 694 714 - -
Accr6g00107 714 SMART cnmp_10 484 615 IPR000595 -
Accr6g00107 714 SUPERFAMILY Voltage-gated potassium channels 87 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00107 Accr-Chr6 1813717 1867268 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00107 1 712 Ion Channels AT5G53130 62.569 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00107 K05391 - qsa:O6P43_017768 1019.99