Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00102 ATGGGATTCGAACCTCAATCATCATCAGCATACTCGAACCTCGACTCCATCCTAGTATCTGACTTGCAAGACAATGAAGAAGAACAAATTTTCTGTTCCTACGCTTCATGGCTGGAAAAGCATCCCTCTGCATTGGACAAGTTTGAGGAAATGATGAGCATTGCTAAATTAAAAGAGGTCGTTGTGTTTCTGGACTATGATGGGACTCTCTCTCCCATTGTTGATGACCCTGATCAAGCTCATATGACTGATGCTATGCGCACAGCAGTAAATGAAGTTGCTTCTTTTTTTCCTACAGCAATTGTCAGTGGAAGGAGTCGAAAAAAGGTAAGTGAATTTGTGAGGTTGAGAAATGTGTACTATGCTGGAAGTCATGGGATGGATATATCAACCCCAAAAGGCTCTTCCAAAACTCAAGACCAGAAACATCAGACTAAGGCTGTTGATGAGAAGGGTAATCAAGTAGTTCACTTTCATCCCGCAGAAGATTTTCTCCCAACTCTCAAGGAGATAATTCAGGTTCTGAAAGAAAATGTTCTAAGAGTAGAGGGGTCCAAGATAGAGGACAATATGTTCTGCATTTCTGTACACTACAGGCTGGTGAAAAATGAAAAGGAAGTTGGTATTCTCAGAAAGATGGTGGAGTCTATCATGGAAGCTTACCCCAATTTTCACATCTCAGGAGGAAAAAAGGTTATAGAAATACGCCCAAATATAAGTTGGGATAAAGGCTGTGCTGTGCAATATTTGCTGGGCACTCTTGGGTTTGACAACTTTGAAAAGATCGTCCCACTGTACATAGGTGATGATACAACTGACGAAGACGCTTTTAAGGTTATAAGACACATTGGACAAGGTTTTCCAATCATTGTTTCTTCAAAAGCTAAGGAGACAGAAGCTTGTTATTCTCTGCGTGATCCAGATGAAGTTCTGTTTTTCTTAAAACGTCTCGCTAAGTGGAAGAAAAGCTTAGTATAA 978 0.4049 MGFEPQSSSAYSNLDSILVSDLQDNEEEQIFCSYASWLEKHPSALDKFEEMMSIAKLKEVVVFLDYDGTLSPIVDDPDQAHMTDAMRTAVNEVASFFPTAIVSGRSRKKVSEFVRLRNVYYAGSHGMDISTPKGSSKTQDQKHQTKAVDEKGNQVVHFHPAEDFLPTLKEIIQVLKENVLRVEGSKIEDNMFCISVHYRLVKNEKEVGILRKMVESIMEAYPNFHISGGKKVIEIRPNISWDKGCAVQYLLGTLGFDNFEKIVPLYIGDDTTDEDAFKVIRHIGQGFPIIVSSKAKETEACYSLRDPDEVLFFLKRLAKWKKSLV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00102 325 Gene3D - 60 159 IPR023214 -
Accr6g00102 325 Gene3D - 185 324 IPR023214 -
Accr6g00102 325 NCBIfam trehalose-phosphatase 60 319 IPR003337 GO:0003824|GO:0005992
Accr6g00102 325 SUPERFAMILY HAD-like 61 321 IPR036412 -
Accr6g00102 325 NCBIfam HAD-IIB family hydrolase 62 284 IPR006379 -
Accr6g00102 325 FunFam Trehalose 6-phosphate phosphatase 161 238 - -
Accr6g00102 325 CDD HAD_TPP 61 310 - -
Accr6g00102 325 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 27 323 IPR044651 GO:0004805|GO:0005992
Accr6g00102 325 Pfam Trehalose-phosphatase 63 307 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00102 Accr-Chr6 1672972 1676159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00102 62 318 Trehalose Biosynthesis Gene Families AT1G60140 24.621 1.94e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00102 K01087 - gmx:100799466 442.965