Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00096 ATGGCCAAACGCCGCAGAAAGACTAGTAGCTCTTACTCTGAAGAGGTGAGCAGCATTGAGTGGGAGTTCATCAACATGACAGATCAAGAAGAAGATCTAATTCACAGAATGCACAGACTTGTGGGAGACAGGTGGAACCTGATAGCTGGGAGGATTCCAGGACGAAAAGCTGAGGAGATTGAGAGGTTTTGGATTATGACTTACGGGCATGTCTTTGCCTCCAAAAGAACCTCTTCCCACTAA 243 0.465 MAKRRRKTSSSYSEEVSSIEWEFINMTDQEEDLIHRMHRLVGDRWNLIAGRIPGRKAEEIERFWIMTYGHVFASKRTSSH 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00096 80 FunFam MYB-like transcription factor 25 67 - -
Accr6g00096 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 68 - -
Accr6g00096 80 SUPERFAMILY Homeodomain-like 27 66 IPR009057 -
Accr6g00096 80 SMART sant 22 70 IPR001005 -
Accr6g00096 80 CDD SANT 25 64 IPR001005 -
Accr6g00096 80 Pfam Myb-like DNA-binding domain 26 65 IPR001005 -
Accr6g00096 80 Gene3D - 26 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00096 Accr-Chr6 1598561 1600207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00096 25 64 MYB Transcription Factor Family AT5G40330 57.500 1.84e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr6g00096 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00096 K09422 - qsu:112022944 125.561