Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00062 ATGGTGTCGGTAAATCCGAACCCGGCTCAAGGCTTCTACTTCTTCGATCCCGCCAAGATGGGGCTTCCCGGTGTTAATCATACCCCGCCACTTCCGGCTTCTGCGTCTGCGGCCCCCACCGCCGGCGGCAGTACTGCTTCGTACGGGGAGGATCCGAGTAAGAAGATCCGAAAACCATACACGATTACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGACCGTGACTGGAAGAAGATTGAAGCATTTGTTGGTTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAGTATTTCCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTGCCTCCCCCTAGGCCAAAAAGGAAGGCTGCTCATCCCTACCCACAAAAGGCGCCTAAAAATGCTCCAGCAGTATCCCAAGTTACAATGCCATTGCAATCTTCATCTTTCATTGAGCCCCCATACATTTATAGGCCAGACTCATCATCTGCGCTGGGAACTCCAGTTACCAGTATGCCCTTGTCAAATTGGAATCGTGATAATATCCCACCGCCCAGTGTGCCACAAGTAACTAGAGATGAGATGGGATTGCCTGGGCAAGCTGCTTCTCTAAATTGTGGGTATAGCAGTAGTAATGAGAGCACTCCAAGGGCTTGGGCAGGTAGCAAAGTTATTGATCAAGGAAACTCAGGCAAGCCGATCAAAGTGATGCCAGATTTTGCACAAGTCTATAGTTTTATTGGTAGTGTGTTTGATCCAAATGAAACAAATCACTTGGAGAGACTGAAACATATGGACCCGATAAATGTGGAAGCAGTATTGTTATTGATGAGAAACCTCTCCATCAATTTAATGAGTCCCAAATTTGAAGATCATAGAAGGTTAATTTCATCCTACAATCCTGGCTCTTAG 939 0.4654 MVSVNPNPAQGFYFFDPAKMGLPGVNHTPPLPASASAAPTAGGSTASYGEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAPAVSQVTMPLQSSSFIEPPYIYRPDSSSALGTPVTSMPLSNWNRDNIPPPSVPQVTRDEMGLPGQAASLNCGYSSSNESTPRAWAGSKVIDQGNSGKPIKVMPDFAQVYSFIGSVFDPNETNHLERLKHMDPINVEAVLLLMRNLSINLMSPKFEDHRRLISSYNPGS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00062 312 ProSiteProfiles SANT domain profile. 64 117 IPR017884 -
Accr6g00062 312 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Accr6g00062 312 MobiDBLite consensus disorder prediction 116 148 - -
Accr6g00062 312 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Accr6g00062 312 CDD SANT 68 111 IPR001005 -
Accr6g00062 312 Gene3D - 69 116 - -
Accr6g00062 312 PANTHER SWI/SNF COMPLEX-RELATED 36 294 - -
Accr6g00062 312 FunFam protein REVEILLE 6 isoform X1 68 116 - -
Accr6g00062 312 MobiDBLite consensus disorder prediction 31 54 - -
Accr6g00062 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 64 113 IPR006447 GO:0003677
Accr6g00062 312 SUPERFAMILY Homeodomain-like 60 116 IPR009057 -
Accr6g00062 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Accr6g00062 312 SMART sant 65 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00062 Accr-Chr6 950187 954538 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr6g00062 Myb_DNA-binding 2.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00062 - - gmx:778090 471.855