Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00051 ATGACCGGAGCAAGGTTTTCTTATGTGAAATGTCTCCAGAAATATTCAGCTAAGGGTTCCTTTAACGTGGAATTAGTTCAGCCAAATCAACGTATTATGAACCTTACAAGATCTGTGGATTGCGTTCATTTAAGATTTCTGAGTACTACATTCGGTCGAGCTTATTCCAAACGAGAGTTACAGTTACCTGAAATTTTTGCCAAGAACCAGTTTAGAACGATGATTTCTGGAAACAGCAACCTCTTAACCAGACCCGGGGCTTCGTTTTCTCCCAATGTTTCTAGTTTTTTCTTCCATAAAGCTTTCCCTTTTGCTTCGCCTTCAATGACCCTCTTGTTGAATCATCGACCATATTCATCATCTCTGGGTGGCAATGGAAGTAGAGATGGGAGCAATGATTTTCCACCTAATTCTGGGGCAAGTGACACGAATGCCAGCATTGATTCTATTGGTACAAGTGATTGGACTGATAAAATCAAAGATGCTTGGCAGAGTGCAGTAGAGACAGTAACATATTCTGCACAAAAGGTTAAAGAAGCCTCTGATGAGCTGACTCCACATGCTCAACAGTTGCTCGACTCACATCCATTCCTTAAAGATGTGATTATTCCAGTTGGTGGTACTTTTACTGCCACACTAATAGCCTGGATTGTGATGCCTTGGATCTTAAGAAAATTTCACAAATATGTAATGCAACGTCCTGCTGCAATATTTCCAGGAAGCACATCTGAGAAGCAAGTTCCTTATGAGAAAAGTATTTGGGGTTCTTTGGAAGATCCAGTGCGATATTTGGTTACCTTCATGGCATTCTCACAGATTGGTCTACTGGTAGCTCCAACAACTGTGGCCTCACAATACCTTACTCAGGCTTGGAGGGGTGCAGTGATCCTTTCATTTGTGTGGTTTTTGCATCGATGGAAAACAAATGTCTGGTCACGCATTTTGTCTGGTCAAAATTTACTCGGGTTTGATCGAGATAAATTGATCGCTCTAGACAAAATATCATCTGTGGGTCTATTTGTGATTGGTATAATGGCTTTAGCTGAGGCTTGTGGAGTGGCTGTGCAATCTATTATAACTGTTGGTGGGATAGGAGGAGTTGCCACTGCTTTTGCTGCTAGAGACATACTTGGAAATGTATTCAGTGGGTTGTCTGTGCAATTTTCAAAGCCCTTTACAGTTGGAGATACAATAAAAGCTGGCTCGGTAGAAGGTCAGGTGGTGGAAATGGGACTTACTACTACATCATTGCTGAATGCTGAGAAGTTCCCAGTTATAGTGCCGAACTCACTTTTCTCTAGCCAGGTAATAGTGAACAAGTCTCGTGCTGAATGCCGTGCCATCGTGTCTAAAATTCCTTTGCGAATTGAGGACATAAGTAAAATACCCAAGATATCAGATAAAATCAAGACAATGCTAAGAACAGATCCTGTGGTTTTCTTAGGGAAAGGGGTTCCTTACTGTTACATGTCGCGAATCGAAAGTTCATATGCAGAACTGACTATTGGATACAACCTCAAGTACATGCGTAAAGATGAGATGTACTCTGCAGAACAAGATATTCTGCTACAGGCGGCCCAGATTATTAAGGCGCATGGTGCTGAACTTGGCAATACCTGGCAAAACATGCCCTAA 1635 0.4183 MTGARFSYVKCLQKYSAKGSFNVELVQPNQRIMNLTRSVDCVHLRFLSTTFGRAYSKRELQLPEIFAKNQFRTMISGNSNLLTRPGASFSPNVSSFFFHKAFPFASPSMTLLLNHRPYSSSLGGNGSRDGSNDFPPNSGASDTNASIDSIGTSDWTDKIKDAWQSAVETVTYSAQKVKEASDELTPHAQQLLDSHPFLKDVIIPVGGTFTATLIAWIVMPWILRKFHKYVMQRPAAIFPGSTSEKQVPYEKSIWGSLEDPVRYLVTFMAFSQIGLLVAPTTVASQYLTQAWRGAVILSFVWFLHRWKTNVWSRILSGQNLLGFDRDKLIALDKISSVGLFVIGIMALAEACGVAVQSIITVGGIGGVATAFAARDILGNVFSGLSVQFSKPFTVGDTIKAGSVEGQVVEMGLTTTSLLNAEKFPVIVPNSLFSSQVIVNKSRAECRAIVSKIPLRIEDISKIPKISDKIKTMLRTDPVVFLGKGVPYCYMSRIESSYAELTIGYNLKYMRKDEMYSAEQDILLQAAQIIKAHGAELGNTWQNMP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00051 544 SUPERFAMILY Sm-like ribonucleoproteins 375 440 IPR010920 -
Accr6g00051 544 MobiDBLite consensus disorder prediction 122 147 - -
Accr6g00051 544 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 155 539 - -
Accr6g00051 544 Gene3D - 286 390 - -
Accr6g00051 544 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 287 374 IPR011014 GO:0016020
Accr6g00051 544 Pfam Mechanosensitive ion channel 333 535 IPR006685 GO:0016020|GO:0055085
Accr6g00051 544 Gene3D - 391 439 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00051 Accr-Chr6 860928 864346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00051 80 542 Mechanosensitive Ion Channel Family AT4G00290 59.615 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00051 K22047 - gmx:100789047 673.7