Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00041 ATGGATAAGGAGCAAACCCCCAAAATTGCCAGAAGGACGACGAGATCTTTGGCTTCGGCATCTACTTTAGATAACGCCCTGACTGAAGTAACTAATTGTGCTTCTCCTCCAGCAATAAATCACCTCATAGTTGAAGGAGATCCAGATGTGGATAGGGAGGGCACCCCACAAATTCCCAGAAGAACAACCAGATCTTTGGCTTCAGCATCCAATTCAGATAATGTAGCAACAAAAGTAACTAGCATCGACCCTCCTACAATAAATGACCTTTTAGTTGGAGGAGATCCTATCAGTCTGGATGATTTAATATCTACTTTTCCTGGTAGACGTAACCAGGTTCTTGAGCTTGTGCGTCTTTTGGGACCTTTGAATTCACCAATATTGCCTTTATTTGTGTACGGTGGTCCTTCTACAGGAAAAACCAGCATCATTCTTCAATTGTTTAGGCATCTCAACAGGCCTCTTGTTTATTCAAGCTGTAGTACATGCTATAATCAGCGGATCTTGTTTGAATCTATTTTGAATTCATTGTTTCTTCATAGAAAAAGTGCTGCCAATGGTTATTCGAATGCAAAACGATGTGAAAGACCATCTGACTTTGTCAATTTTCTTAGGGAAGCATTGGCCAATTTGATAAATAATCTGAAGTCAAATTCAGAGAAATCAAAATCAAACAAGATGGAAGCAAGGGGAACTGGAAATATGGTATACTTGGTATTTGACAATTTTCATCTTGTTAGGGAGTGGGATAAAAGTTCTACTATAGTACCCTTCCTGTTTAATCTCTATGATCTGCTAAATATACCAGAGTTAGGCTTGATTTTTATTAGCAGTACTTCGCCTGATACCTATTATGCTAATATGGGTTATGTGGAACCTGTCCCCGTCTTCTTTCCTGATTATACAGAGGATAATCTTCATCAAATATTCTTGAGAAACCAAGCAAATCAAAAGTTGTATTCTTCATTTCTGGATGTGGTTTTGAGGCCTTTCTGTAGAATCACAAGACAAGTGGATGAACTGTTTGCGACTTTCAAGTCACTATTTGAAAAATATTGTGAACCTTTAAGTGATAATGGTGTTGTTCCTAGCGAAGACATGAAGAGAAGGTTATTCAGCCATCTTAAGCCTCATATTGGTTCTTATTTGAATGAAATATTTAAGGTTTCATTTCCTCCTTCACTTGAACTTGAGACCCATAAAGAGACCAAACGGAAGGGGAATCCCAAGAAATTGGAGAGATATGAAGAAATTGAAGAGCTGGAATTTCACATGTCTACTTGTGCTAAATATCTCCTTATTTCTGCATTTCTTGCATCCCGAAACCCTGCAACCCTTGATGACTCACTTTTTGATTCGACTGGTGGTTCAAACAGTCGAAAGCGTAAGAGGAAGACCTCCACAAAAGTGCAGGAACAGAAACAAAGTGCAGAAGAGGAACTGCTAATGAAAGGACCTGGAACTTTTCCGCTAGAGAGGTTGTTAGCCATATTCCAGTGTATTGTATCGGTTGCAGAAGATCCATCTGATGAAGAGGATCAAAGGAATGATGGATTAGGAATCCATGGTGGCAATGGTGGGCTAATGTCCGACGTTCTTTTACAACTATCCAGTCTCTGCAATGCTAATTTTATTATTAAAGGAGGAAGCTGTGCCATAGAAGGCTCAACTCGGTATCGATCTGCTATATCTGAAGACCTTGCTTTGAAGGTTGCAAGGAGCCTCAAATTCCCGCTGTCAAAGTATTTGTATAGAAGATAA 1761 0.3935 MDKEQTPKIARRTTRSLASASTLDNALTEVTNCASPPAINHLIVEGDPDVDREGTPQIPRRTTRSLASASNSDNVATKVTSIDPPTINDLLVGGDPISLDDLISTFPGRRNQVLELVRLLGPLNSPILPLFVYGGPSTGKTSIILQLFRHLNRPLVYSSCSTCYNQRILFESILNSLFLHRKSAANGYSNAKRCERPSDFVNFLREALANLINNLKSNSEKSKSNKMEARGTGNMVYLVFDNFHLVREWDKSSTIVPFLFNLYDLLNIPELGLIFISSTSPDTYYANMGYVEPVPVFFPDYTEDNLHQIFLRNQANQKLYSSFLDVVLRPFCRITRQVDELFATFKSLFEKYCEPLSDNGVVPSEDMKRRLFSHLKPHIGSYLNEIFKVSFPPSLELETHKETKRKGNPKKLERYEEIEELEFHMSTCAKYLLISAFLASRNPATLDDSLFDSTGGSNSRKRKRKTSTKVQEQKQSAEEELLMKGPGTFPLERLLAIFQCIVSVAEDPSDEEDQRNDGLGIHGGNGGLMSDVLLQLSSLCNANFIIKGGSCAIEGSTRYRSAISEDLALKVARSLKFPLSKYLYRR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00041 586 Pfam AAA ATPase domain 106 254 IPR041664 -
Accr6g00041 586 FunFam Origin of replication complex subunit 5 106 287 - -
Accr6g00041 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 370 IPR027417 -
Accr6g00041 586 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 98 585 IPR020796 GO:0000808|GO:0005634|GO:0006260
Accr6g00041 586 Coils Coil 460 480 - -
Accr6g00041 586 Coils Coil 201 225 - -
Accr6g00041 586 MobiDBLite consensus disorder prediction 448 479 - -
Accr6g00041 586 Gene3D - 106 284 IPR027417 -
Accr6g00041 586 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 296 583 IPR047088 -
Accr6g00041 586 MobiDBLite consensus disorder prediction 45 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00041 52 586 Core DNA Replication Machinery Family AT4G29910 59.294 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00041 K02607 - qsa:O6P43_017636 775.007