Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00023 ATGGGAATTCAGTGCTCCACACTTATTCCATGTTGTGTGAATTCCCAAGTGAAGGCATCTGCTCTTGAAGCTCTTGATGCTGTTAACGAGGATACAAGTGAGACCAATAACTGGCCTGCATTCCGTGAATATACATTTGAGCAGCTTAAGAATGCAACATCTGGTTTCGCTGTGGAGAATATTGTATCAGAACATGGGGAGAAGGCTCCGAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGAATTGCTGTTAAGCGGTTCAATAGAAATGCTTGGCCTGATGCTCGGCAATTTTTGGAGGAAGCAAAATCAGTTGGTCAGCTCCGTAACCAAAGATTGGCAAATTTGCTTGGCTGTTGTTGTGAAGGTGATGAGAGGCTGCTTGTGACTGAATATATGCCAAACGAAACACTTGCCAAACACCTTTTTCATTGGGAAACACAACCAATGAAATGGGCAATGCGACTGAGAGTTGTTCTATATATTGCGCAAGCTCTAGAATACTGCACAAGTAAAGGGCGTGCTCTCTACCATGACCTTAATGCATATAGGATTCTTTTTGATGAGGATGGTAATCCTAGGCTTTCGAGTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCCTTTACCCCACCAGAGTATCTGAGAACTGGGAGAGTAACACCAGAAAGTGTAATTTATAGCTTCGGTACTCTTTTGCTCGATCTTCTTAGTGGGAAGCATATTCCCCCAAGCCATGCCCTTGACTTGATTCGGGACAGAAATCTTCAGATGCTGACAGACTCTTGTTTGGAAGGACAATTTTCTGATGACAATGGAACTGAGTTGGTACGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAACGGCCAAATCCCAAGTCATTGGTTGCTGCATTGGCACCACTTCAGAAAGAAATGGAGGTTCCTTCACATGTCTTGATGGGTGTTCCACACACTGCTTCTTTCGCTTCATTGTCCCCACTTGGCGAAGCATGCTCAAGAAAAGATTTGACTGCTATACATGAAGTTCTGGAAAATATTGGCTATAAAGATGATGAAGGAGTGACAAATGAGTTGTCGTTCCATATGTGGACTGATCAAATGCAAGACACGCTAAATTATAAGAAAAAGGGGGATGTTGCTTTCCGGCAGAAAGATTTTCTACTTGCTAGTGAGTGTTACACACAGTTCATTGATGTTGGAACGATGATTTCCCCAACCGTCTATGCACGGCGCAGTTTATGCTATCTCATGAGTGACATGGCTCAAGAAGCTTTGAATGATGCAATGCAAGCACAAATAATCTCTCCCGTATGGCACATTGCATCGTATCTTCAATCAGTGGCCCTCGCCAAGATCGGGATGGGGAATGAAGCTCAGGTAGCCCTTAAGGAAGGCACAGCAATGGAAGCCAAGAGAAATCCAAAGTAA 1464 0.4324 MGIQCSTLIPCCVNSQVKASALEALDAVNEDTSETNNWPAFREYTFEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEAKSVGQLRNQRLANLLGCCCEGDERLLVTEYMPNETLAKHLFHWETQPMKWAMRLRVVLYIAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDNGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKEMEVPSHVLMGVPHTASFASLSPLGEACSRKDLTAIHEVLENIGYKDDEGVTNELSFHMWTDQMQDTLNYKKKGDVAFRQKDFLLASECYTQFIDVGTMISPTVYARRSLCYLMSDMAQEALNDAMQAQIISPVWHIASYLQSVALAKIGMGNEAQVALKEGTAMEAKRNPK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00023 487 SUPERFAMILY TPR-like 381 479 IPR011990 GO:0005515
Accr6g00023 487 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Accr6g00023 487 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Accr6g00023 487 SUPERFAMILY Protein kinase-like (PK-like) 35 320 IPR011009 -
Accr6g00023 487 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 485 IPR045845 GO:0004672|GO:0009742
Accr6g00023 487 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00023 487 FunFam probable serine/threonine-protein kinase At4g35230 380 487 - -
Accr6g00023 487 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Accr6g00023 487 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Accr6g00023 487 Gene3D Tetratricopeptide repeat domain 380 487 IPR011990 GO:0005515
Accr6g00023 487 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00023 Accr-Chr6 446809 451461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00023 10 313 Glycoside Hydrolase AT3G07070 34.337 4.52e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Accr6g00023 PK_Tyr_Ser-Thr 3.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00023 K14500 - gmx:100799260 892.108