Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00008 ATGGATATAACTTGTAGCTTACCGCAGTCAAGAATATTAGATGGAGGGATCAGTTACAAACAAAAGTATAATCTCGGTTCTTGCATGACATTCAGAAGATGTTTTGGTTGTGCCCTCCTTGGCAACTCGAGTACTATTTTGAAAGCTCGGTTCCGTGGGATAAACAAAGTCAGTAGTACTGCTTTTCGCAGTGCTAGATTGGTTTCCGCGGGAGAGCTCAAAGTTTCAGATATGAAGAGAACTTGGTCTAGTAAGAAGAGTGATGTTTTTACGGGATCCAAAGCAATTTGGGTAAAGTGTCAGGGTAATGATTCTTTGGCTTATGTTAATGGTAATGGTCGTAATGTCGATTATGTGAAGGGTGCCGGTGAGGAATTGGGATTAGGGTCTACTTCTAGTGCTGAACTGACTGTTTCAGTAGAAGACGAAGAAGGGGGACATGGAGTAGAAGAAGACCCGCACAGTGTGGATGAACTGAAAGAATTATTGCAAAAGGCCTTGAAGGATTTAGAAGTTGCAAGAGTAAATAGTGCCATGTTCGAGGAGAAGGTTAAAAAAATTTCAGAGACTGCAATATCTTTGCAGGACGAAGCATCAAATGCTTTGAACAATGTTAATACTACTCTTGATGCGATCCAAGACATTGACACTGAAGAATGTATGGCGAAAGAAGCTGTTCAAAAAGCAATGATGGCTCTTTCGTTGGCTGAGGCGAGGCTACAAGTGGCCATAGAATCTTTGGAGGTTGCAAAAGAAGAACATGATTCTCCACAAGGTTCTGATGAGAGTGATGGGGACAATGACACAACAGAGGAGGATAAGGCACTTTTGGTTGCTCAGGAAGATGTCAACGAATGCCAGACAAATTTAGCAAATTGTGAAGCAGCACTGAGACAGTGGCAGAATAGAAAGGAGGGATTGCAGAAGGAAGTGGAGAAGTTGAACGAACTTGCTGAAAAGGCACAGTTGGATGCATCAAAAGCAGAGGAGGATGTCACAAATATAATGCTTTTAGCAGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCTCAGCGAGTAAATGATGCCGAGATTGCCTTACAGCGAGCAGAAAAATCCATTTCGAGCACTAATGCTGATACCACAGAAACTATGCAAGTACAAGATTCTGAGGGGGTTTCTGAGGAGGAGAAAGCAGTTCAAGACTTTTCTGGTGACGCCATTACTGAAGTGGATGGAGATTTGCCAATTGATGATGAATCCATGCTTCAGAAGCAATCATCAGAGACACTAACTGATCAAAGCAGCCAAAGTTTGATGGAGTCAATTCACTCTGATTACCTGAGTGATCATGAGAATGGACAGTTAGACTTAGACTCTTCTGTGGAAGCTGGATCAGAAGTAGAGAAATTGAAAAATGCTGTTCAGACAAAAAAGCAGGAGACACAGAAAGATTTTACTAGAGATAGCTCAACCTTTGCTCCCAAAGGATTATCGAAGTCATCCCGTTTCTTTTCTGCATCATTCTTCTCTTTTTCGGTAGATGGAGCTGAGTTTACACCAGCATCAATTTTCCAAGGTTTTGTGGAATCGGTACAGAAGCAGTTACCTAAGGTGGTTCTTGGTTTATTATTAATGGGAGCAGGGGTTGCCTTTTATACCAGTCGAGGAGATAGGAGCTCTCAGCTCTTTCAACAGCCAGAAGTCATTGCAAGCAGTATTGAAGAAGTTTCCTCAAGTGAAAAGCCTGTCGTCAGACAACTTCAGAAACTTCCTAAGAGAATTAAGAAAATTATTGCATCATTACCTCAGCAAGAGGTGAATGAGGAGGAAGCTTCACTTTTGGACATGCTTTGGTTATTGTTGGCGAGTGTTATATTTGTGCCTATATTTCAAAAAATTCCTGGAGGGAGTCCTGTTCTTGGTTACTTGGCTGCTGGTATTTTGATTGGGCCTTATGGTCTCTCCATCATCCGTCATGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCTTATTATTCAATATTGGCTTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGGTTAGGCTCTGCTCAGGTGTTGGTGACTGCTGTAGCAGTTGGCTTGGTGGCCCATTTTGTTTGTGGTCTTCCAGGCCCTGCTTCAATTGTTATTGGGAATGGTCTGGCATTATCATCCACTGCTGTTGTCCTGCAAGTATTGCAGGAAAGAGGTGAGAGCACATCACGGCATGGCCGATCTACTTTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATCCCTCTTATCTCACCAAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCTATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCTGGTGGACGATTGTTCCTTCGACCAATATATAAGCAGATTGCTGAAAATCAGAATGCAGAAATATTTTCAGCCAATACACTCCTCGTTATTCTTGGGACTAGTCTTCTTACTGCTAGGGCAGGACTTTCCATGGCACTTGGGGCATTTTTGGCTGGTTTACTTCTTGCAGAAACTGAATTTTCCTTACAAGTCGAATCTGATATAGCTCCATATCGTGGTCTTCTATTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTCCTTCTGTCAAACTTTACAGTCATCATGGGGACACTTGGACTCTTAATTTGTGGCAAGACTATCTTGGTTTCTTTGATTGGAAGAAGCTTTGGGATTTCGCTTATTTCTGCCATTAGAGTTGGTCTACTTCTTGCTCCTGGAGGGGAATTTGCGTTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGCATAATGTCTTCCCAACTTTCATCTCTACTATTTCTTCTTGTGGGAATCTCTATGGCTCTTACACCATGGTTAGCTGCCGGCGGCCAGCTTATTGCTTCCCGTTTTGAGCTGCATGATGTTCGAAGCTTATTACCTGTAGAAAGTGAGACGGATGATTTGCAAGATCACATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTTCTTTCTGAGCGACTGATCCCTTTTGTTGCTCTAGACGTGAGAAGTGATAGAGTGGCAGTTGGTCGTGCTCTGGATCTGCCCGTATACTTTGGAGATGCTGGTAGTCGTGAGGTCCTACACAAGATTGGGGCTGAAAGAGCATGTGCTGCCGCGGTAACTCTAGATTCTCCTGGTGCAAATTATCGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGAGCTCATGATGTTGATCATGGCCTGAATTTAGAAAAAGCTGGAGCTACTGCTGTTGTACCGGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTACTTGCTCAGGCTAAACTTCCCACGTCAGAGATTGCATCAGCTATAAATGAATTCAGATCCCGGCATCTGGCTGAGCTTTCTGAGCTGTGTGAGGCAACTGGCAGTTCCCTTGGTTATGGATTTAACCGAATGGCTAGCAAATCCAAATCTCAATCCACAGATTCATTGGATGATAACCAAATCTCTGAAGGGACACTAGCAATATGA 3636 0.431 MDITCSLPQSRILDGGISYKQKYNLGSCMTFRRCFGCALLGNSSTILKARFRGINKVSSTAFRSARLVSAGELKVSDMKRTWSSKKSDVFTGSKAIWVKCQGNDSLAYVNGNGRNVDYVKGAGEELGLGSTSSAELTVSVEDEEGGHGVEEDPHSVDELKELLQKALKDLEVARVNSAMFEEKVKKISETAISLQDEASNALNNVNTTLDAIQDIDTEECMAKEAVQKAMMALSLAEARLQVAIESLEVAKEEHDSPQGSDESDGDNDTTEEDKALLVAQEDVNECQTNLANCEAALRQWQNRKEGLQKEVEKLNELAEKAQLDASKAEEDVTNIMLLAEQAVAFELEAAQRVNDAEIALQRAEKSISSTNADTTETMQVQDSEGVSEEEKAVQDFSGDAITEVDGDLPIDDESMLQKQSSETLTDQSSQSLMESIHSDYLSDHENGQLDLDSSVEAGSEVEKLKNAVQTKKQETQKDFTRDSSTFAPKGLSKSSRFFSASFFSFSVDGAEFTPASIFQGFVESVQKQLPKVVLGLLLMGAGVAFYTSRGDRSSQLFQQPEVIASSIEEVSSSEKPVVRQLQKLPKRIKKIIASLPQQEVNEEEASLLDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVAVGLVAHFVCGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRSTFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLFLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFTVIMGTLGLLICGKTILVSLIGRSFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLLVGISMALTPWLAAGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAVTLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIASAINEFRSRHLAELSELCEATGSSLGYGFNRMASKSKSQSTDSLDDNQISEGTLAI 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00008 1211 Gene3D - 1011 1175 - -
Accr6g00008 1211 MobiDBLite consensus disorder prediction 371 407 - -
Accr6g00008 1211 FunFam K(+) efflux antiporter 2 chloroplastic 1011 1175 - -
Accr6g00008 1211 Pfam TrkA-N domain 1016 1129 IPR003148 GO:0006813
Accr6g00008 1211 Coils Coil 283 331 - -
Accr6g00008 1211 MobiDBLite consensus disorder prediction 460 487 - -
Accr6g00008 1211 Coils Coil 156 176 - -
Accr6g00008 1211 Pfam Sodium/hydrogen exchanger family 613 983 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Accr6g00008 1211 FunFam K(+) efflux antiporter 2 chloroplastic 603 989 - -
Accr6g00008 1211 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 190 1202 - -
Accr6g00008 1211 Coils Coil 353 373 - -
Accr6g00008 1211 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 614 894 IPR004771 GO:0006812|GO:0008324|GO:0016020
Accr6g00008 1211 MobiDBLite consensus disorder prediction 1191 1211 - -
Accr6g00008 1211 MobiDBLite consensus disorder prediction 465 479 - -
Accr6g00008 1211 MobiDBLite consensus disorder prediction 250 270 - -
Accr6g00008 1211 ProSiteProfiles RCK N-terminal domain profile. 1015 1137 IPR003148 GO:0006813
Accr6g00008 1211 Gene3D - 603 989 IPR038770 -
Accr6g00008 1211 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1012 1153 IPR036291 -
Accr6g00008 1211 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00008 Accr-Chr6 225578 250511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00008 100 1211 Inorganic Solute Cotransporters AT4G00630 70.782 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00008 K03455 - gmx:100798822 1658.27