Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g03044 ATGGTTTCCTTATCAAGTGTTTCATTGTTTCCCCCGTCCACCGGGCATGGCGCCTCTCGATCGACTAAATTTGCGGCTGCAGATGCAAGGGCGATAAGTTCATTCTATGCTAGGCAAAGCAACGAGCGTAGGAAGGCTGTTTGTGCGTGTGTGGCTTCTCCTCGAAACTTGATGAGCGATGAGTCATCGGCAATTAAATTTAATGGTTCTTCTAAATCAGAGCACTTAAACACAATAGGGGATACTGAGGACGACTCTGATGTTCTTATTGAGTGTAAAGAGGTCTACAAGTCTTTTGGGGAAAAGAAAATCCTAAATGGTGTGAACTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCTACTGTTTTGAAGATTATTGCAGGATTGCTTGCTCCGGACAAGGGAGATGTTTACATTCGAGGTAAAAAGAGGGCTGGTTTGATAAGCGACGAAGAGATATCTGGCCTTCGGATTGGATTAGTGTTCCAAAGTGCAGCTCTTTTTGATTCTTTGACTGTACGTGAAAATGTTGGTTTTCTCTTGTATGAACAATCAAGAATGTCTGAGGATCAAATTTCAGAGCTTGTCAAGGAAAGCTTGGCAGCTGTTGGATTAAAGGGTGTTGAGGATCGGCTGCCTTCGGAGTTGTCCGGTGGGATGAAAAAACGAGTTGCCTTAGCACGGTCCATTATTTATGACACTACAAATGATTCAATAGAACCAGAGGTGCTTTTGTATGATGAACCAACTGCTGGACTGGATCCCATAGCTTCTACTGTAGTTGAGGATCTGATCCGCTCTGTTCACATAAAAGGACGCGATGCTCTTGGAAAACCTGGGAAGATTGCATCTTATGTAGTTGTCACCCATCAACATAGTACCATTAAAAGAGCTATTGACAGGTTATTATTTTTACACAAGGGTAAGATTGTCTGGGAAGGAATGACGCATGAATTTACTACATCAACAAATCCAATTGTTCAACAGTTTGCATCTGGAAGCCTGGACGGTCCTATCAAATATTAG 1053 0.4274 MVSLSSVSLFPPSTGHGASRSTKFAAADARAISSFYARQSNERRKAVCACVASPRNLMSDESSAIKFNGSSKSEHLNTIGDTEDDSDVLIECKEVYKSFGEKKILNGVNFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGDVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYEQSRMSEDQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTNDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g03044 350 MobiDBLite consensus disorder prediction 1 21 - -
Accr5g03044 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 331 IPR027417 -
Accr5g03044 350 MobiDBLite consensus disorder prediction 1 20 - -
Accr5g03044 350 Gene3D - 77 342 IPR027417 -
Accr5g03044 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Accr5g03044 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 5 350 - -
Accr5g03044 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Accr5g03044 350 SMART AAA_5 114 318 IPR003593 GO:0016887
Accr5g03044 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
Accr5g03044 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g03044 Accr-Chr5 55948206 55955014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g03044 90 334 Calmodulin-binding Proteins AT2G36910 28.077 1.56e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g03044 - - qsa:O6P43_011318 567.77