Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g03022 ATGTTGAAGCTGTCCCGCTTGCTCGCTTCCAGGCATCAGGTATCAGAAACATTGTTATCTCAGAGAGCTGATGTTAGAGACAGTCTATGGCTTCTGTGTGGTTCTACTACCATTTCAGCAAGAATTTATACTGCTGCAAATAATTATTCCTCTAAAGGATATACTTCGAGTCAAATATTTGTTCCGTATTCTGTTTTTAAAGGAAAAGCTGCACTCTCTCTTAGTCCCCGACTTCCAACTTTCACTAAGTTGGCTTCTGGGGCTGTTGTAATCGATCGCCGTGGCACAATGATGATGACTTTTGTACCTGCACTTGGTGAACGCAAATATGACTGGGAGAAGAAACAGAGATTTGCTCTTTCAGCAACAGAGGTTGGTTCTTTGATAAGCATGGGCTCCACAGGTTCCTGTGAATTCTTTCATGACCCTGCAATGTTATCAAGTAATGCTGGTCAAGTCAGGAAGAGCTTATCAATTAAGCCACATGCAGACAGCTCTGGGTATTTTATGTCTTTGTCTGTTGTCAATAACATTTTAAAAACCAAAGAATACCTGTCTGTTCCAGTCACAACTGCTGAGTTTGCTGTGATGAAGACTGCCTGCAGCTTTGCGTTGCCGCACATTATGGGTTGGGATCGTCTGACTCAGGATCAGTCCGGAGGCATGCATGGTCAGCAATCAAAGGTGGACCCGCAAGTTGTAGACTTGGAGTGGTCAAAGTGA 723 0.4371 MLKLSRLLASRHQVSETLLSQRADVRDSLWLLCGSTTISARIYTAANNYSSKGYTSSQIFVPYSVFKGKAALSLSPRLPTFTKLASGAVVIDRRGTMMMTFVPALGERKYDWEKKQRFALSATEVGSLISMGSTGSCEFFHDPAMLSSNAGQVRKSLSIKPHADSSGYFMSLSVVNNILKTKEYLSVPVTTAEFAVMKTACSFALPHIMGWDRLTQDQSGGMHGQQSKVDPQVVDLEWSK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g03022 240 SUPERFAMILY ssDNA-binding transcriptional regulator domain 57 218 IPR009044 GO:0003677|GO:0006355
Accr5g03022 240 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 35 240 IPR013742 GO:0003697|GO:0006355|GO:0006952
Accr5g03022 240 Pfam Whirly transcription factor 65 199 IPR013742 GO:0003697|GO:0006355|GO:0006952
Accr5g03022 240 Gene3D Transcriptional Coactivator Pc4; Chain A 49 224 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g03022 Accr-Chr5 55663939 55666807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g03022 56 240 Whirly Transcription Factor Family AT1G71260 68.254 1.52e-90 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Accr5g03022 Whirly 3.4e-57 CL0609