Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g03016 ATGTGTGACCAACTCAAAGATCAGTACCAGTTGTGCCAAGAGATCGGTCGTGGTCGTTTCGGCACCGTCTTCCGCTGCTTCCACCCCGTCTCCAACGACTTCTTCGCCTGCAAAGTCATCGACAAGCGCCTCCTTACCGATTCCACCGATCGCGAGTGCCTCCAGAATGAACCCAAGTACATGGCCCTCCTCTCCCCCCACCCTCATATTCTTCAGATTTTTGACGTCTTCGAGAACGACGATTACCTCTCTGTCGTCCTCGAGCTCTGTGAGCCCCTCACTCTCCTCGATCGCATCATCGATCGCCCCTTGCTGGAGACCGAGGCCGCTTCCATCATGAAGCAGCTCCTAGAGGCAGTCGCCCATTGTCATCGGCTAGGCATAGCCCACAGAGACATCAAACCCGACAATATTTTGTTCGATTCCCAGAATAATCTTAAGGTCGCCGACTTTGGGTCCGCTGAGCGGATCGGCGACGGAGGGACCATGACCGGGGTGGTGGGGACGCCGCATTATGTGGCGCCGGAGGTGCTGTTGGGGAGACAGTACAACGAGAAAGTAGATGTATGGAGTAGCGGGGTGATATTGTACATAATGTTGTCTGGGGTTCCGCCCTTTTATGGAGAATCGGCCGAAGAGATCTTTGAGGCTGTGGTGAGGGCTAATCTGAGGTTCCCATCTAGGAATTTCAGATCCGTGTCTTCCGCAGCGAAGGATCTAATGAGGAAGATGATGTGTAGGGATGCGTCCAGGCGATTATCCGCAGAGCAAGCCCTGAGGCACCCTTGGATCCTGAGTGGAGGAGAGGCCAGCGATCTGACCTGA 825 0.5479 MCDQLKDQYQLCQEIGRGRFGTVFRCFHPVSNDFFACKVIDKRLLTDSTDRECLQNEPKYMALLSPHPHILQIFDVFENDDYLSVVLELCEPLTLLDRIIDRPLLETEAASIMKQLLEAVAHCHRLGIAHRDIKPDNILFDSQNNLKVADFGSAERIGDGGTMTGVVGTPHYVAPEVLLGRQYNEKVDVWSSGVILYIMLSGVPPFYGESAEEIFEAVVRANLRFPSRNFRSVSSAAKDLMRKMMCRDASRRLSAEQALRHPWILSGGEASDLT 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g03016 274 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Accr5g03016 274 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g03016 274 CDD STKc_CAMK 8 263 - -
Accr5g03016 274 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g03016 274 SUPERFAMILY Protein kinase-like (PK-like) 5 266 IPR011009 -
Accr5g03016 274 Gene3D Transferase(Phosphotransferase) domain 1 94 272 - -
Accr5g03016 274 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 274 - -
Accr5g03016 274 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Accr5g03016 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 269 - -
Accr5g03016 274 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 91 - -
Accr5g03016 274 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g03016 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g03016 Accr-Chr5 55618627 55619648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g03016 9 272 EF-hand Containing Proteins AT1G50700 41.418 1.10e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr5g03016 Pkinase 2.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g03016 - K08794 qsa:O6P43_007686 462.996