Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g03009 ATGAGGATTATGATAAAGGGTGGTGTTTGGAAAAACACCGAGGATGAAATCCTCAAAGCAGCTGTCATGAAATATGGTAAGAACCAGTGGGCTCGAATCTCTTCGCTTCTGGTTCGCAAATCCGCCAAGCAATGCAAGGCTCGATGGTACGAGTGGCTTGATCCTTCCATTAAAAAGACTGAATGGACAAGGGAAGAGGATGAAAAGCTTCTTCATCTTGCTAAGCTTATGCCCACACAATGGAGAACAATTGCTCCAATTGTAGGCCGTACCCCTTCCCAGTGCCTTGAACGGTATGAGAAACTCCTTGATGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCACGGAAATTGCGACCTGGTGAGATTGACCCAAACCCTGAGTCAAAGCCTGCACGACCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGTTGTCTGAAGCACGAGCTAGGTTAGCCAACACCAAGGGTAAGAAGGCAAAACGGAAAGCTAGGGAGAAACAACTAGAAGAAGCCAGGAGGCTTGCCTCTTTACAAAAAAAGAGAGAACTGAAGGCCGCTGGAATTGATATCAGGCAGCGGAGGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATCCCATTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAAGATAGACAAGTGGAACAGCCCAAGTTCCCTACCACAATTGAAGAACTTGAGGGAAAAAGAAGGATTGATGTGGAAGCACAGTTAAGAAAGCAAGACATTGCAAAGGATAAAATTGCACAAAGGCAAGATGCCCCCTCTGCTATACTACATGCCAACAAGCTCAATGACCCAGAAACAGTTAGAAAAAGGTCAAAACTGATGCTTCCACCACCCCAAATTTCTGAGCATGAATTAGAAGAAATTGCAAAGATGGGTTATGCTAGCGACCTTGTGTCGAGTGAGGAAATTGCTGAAGGTAGTGGTGCAACACGTGCTCTTCTGGCTAATTATGCTCAGACCCCCAGCCAGGGAATGACTCCTTCGCGAACTCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCAAGGTTGAGGGAGTCTCAGACACCATTGTTGGGAGGAGATAACCCAGAATTGCATCCTTCAGACTTTTCTGGGGTCACTCCCAAGAGAAAGGAATTACAGACTCCAAATCCTATGTTGACTCCCTCTGCTACGCCTGGAGGTGCAGGCCTTACCCCTAGAAGTGGTATGACACCAGCAAGGGATGGCTTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTAAGGGATGAGCTTCATATCAATGAAGACATGGATATGCATGAGAACACAAAACTCGAGCCACAGAGACAAGCTGATCTCAAAAGAAGCTTGCAATCTGGTTTAAGCAGTCTTCCACAGCCAAAAAATGAGTACCAGATAGTTATGCAACCAGCTCCAGAAGATGTTGAAGAACCTGAGGAAAAGTGTGAAGAGGATATGTCTGACAGAATTGCTCGAGAAAAAGCTGAAGAAGAAGCTCGGCAACAAGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAAGGAGCTTCCTAGGCCTCCTGCTGCATCACTGGAACTGATAAGAAATTCTTTGATTATTGCTGATGGGGATAAGAGTTCCTTTGTTCCTCCTACTTTTATCGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTAAGCTTATTGGAACATGACAATGCCAAGTACCCACTTGATGAGAAAGTTAACAAGGACAGGAAAAAAGGAGCCAAGCGTGCTGCAAATGGGTCTGATGTTGTCCCTCTGATTGAAGATTTTGAGGAAGATGAAATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGCTCAGTATCTTCGTGTAGCTATGGGACATGAAAGTGAACCCCTCGATGAATTTGTTGAAGCGCATGGAACTTGCCTTAAAGATCTTATGTACTTCCCTGCCCGTAATGCCTATGGGCTCTCAAGTGTTGCTGGAAATATGGAGAAGCTTGCAGCTTTGCAGAATGAGTTTGAGAATGTGAGAAAAAGGTTGGATGATGGCAAGGAGAAAGTGGTACGCCTTGAGAAGAAGGTGATGGTCCTTACACAAGGCTACGAGATGAGGGGGAAGAAAAGTCTCTGGCCACAAATTGAAGCCACATTCAAGCAGATGGACACTGCTGCAACAGAACTAGAGTGCTTCCAAGTTTTGCAAAAGCAGGAGCAGCTAGCTGCATCACATCGGATAAACAATATATGGGCTGAAGTAGAGAAGCAAAAGGAACTTGAGAAAACCTTTCAAAAGAGATATGGGGATCTTCTGGCAGAAGTGGAAAGGATTCAAAACACTATGAACCAATACAGGGCACATTCTAACCATGAAGAAGAAGTTGCTGCCAAGGAGCGTTCTCTTGAGTCAGCTGAGATTGCATCTGATGAAACGAGCATGCAGGGTATAGAGAATCATGATGGTATATCCAACTCAGATGAGCATGGAAGTGTAGCGTTAGTTAATTCTACACATGATCAAACTCCGGTACAGCAAGTAGACCTGATACAAACCGAGGCCACATCAGGCCCCAGAAATGATGTTGATGTGGATGCTGATAAGGAGCAAATGACACGCGACACTGATGTTAAAGGACAAGATGCGACACCCGTTGCAGAGGAGGAGGGGGTCAGCGCAACAGTAGTACCAGGCAAGAGCATTGATAGCTGCATTGCCCACAGGGAGACCACTCAAGACACGGGGGCTCCAGAGGATAAAAGTATTGAGAGGTGTGACAATCCAGATAAAGCGGCCATACATTATGACAAAATACCAGAAACCGTTAATCTGGATTCAGGTGATAAGAAGCAAAGTTGCTTGATGGGGAGGTCTATTAAGATGGCTCCCGCGTTGGAGATTTTTGATGTTGAAGTTCCTGATGCTAACTCATATGAGTGA 3006 0.4511 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRQVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKDKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISEHELEEIAKMGYASDLVSSEEIAEGSGATRALLANYAQTPSQGMTPSRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPKRKELQTPNPMLTPSATPGGAGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMDMHENTKLEPQRQADLKRSLQSGLSSLPQPKNEYQIVMQPAPEDVEEPEEKCEEDMSDRIAREKAEEEARQQALLRKRSKVLQKELPRPPAASLELIRNSLIIADGDKSSFVPPTFIEQADEMIRKELLSLLEHDNAKYPLDEKVNKDRKKGAKRAANGSDVVPLIEDFEEDEMKDADQLIKEEAQYLRVAMGHESEPLDEFVEAHGTCLKDLMYFPARNAYGLSSVAGNMEKLAALQNEFENVRKRLDDGKEKVVRLEKKVMVLTQGYEMRGKKSLWPQIEATFKQMDTAATELECFQVLQKQEQLAASHRINNIWAEVEKQKELEKTFQKRYGDLLAEVERIQNTMNQYRAHSNHEEEVAAKERSLESAEIASDETSMQGIENHDGISNSDEHGSVALVNSTHDQTPVQQVDLIQTEATSGPRNDVDVDADKEQMTRDTDVKGQDATPVAEEEGVSATVVPGKSIDSCIAHRETTQDTGAPEDKSIERCDNPDKAAIHYDKIPETVNLDSGDKKQSCLMGRSIKMAPALEIFDVEVPDANSYE 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g03009 1001 Coils Coil 683 717 - -
Accr5g03009 1001 FunFam CDC5 cell division cycle 5-like 5 59 - -
Accr5g03009 1001 CDD SANT_CDC5_II 55 106 IPR047240 -
Accr5g03009 1001 MobiDBLite consensus disorder prediction 399 413 - -
Accr5g03009 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Accr5g03009 1001 Coils Coil 167 187 - -
Accr5g03009 1001 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 806 IPR047242 GO:0000398|GO:0000974
Accr5g03009 1001 SMART sant 58 105 IPR001005 -
Accr5g03009 1001 SMART sant 6 55 IPR001005 -
Accr5g03009 1001 MobiDBLite consensus disorder prediction 892 915 - -
Accr5g03009 1001 Gene3D - 60 114 - -
Accr5g03009 1001 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Accr5g03009 1001 FunFam CDC5 cell division cycle 5-like 60 120 - -
Accr5g03009 1001 Gene3D - 5 59 - -
Accr5g03009 1001 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Accr5g03009 1001 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Accr5g03009 1001 Coils Coil 810 830 - -
Accr5g03009 1001 MobiDBLite consensus disorder prediction 379 423 - -
Accr5g03009 1001 CDD SANT 10 53 IPR001005 -
Accr5g03009 1001 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Accr5g03009 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Accr5g03009 1001 Pfam Myb-like DNA-binding domain 10 70 - -
Accr5g03009 1001 MobiDBLite consensus disorder prediction 113 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g03009 Accr-Chr5 55523293 55528269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g03009 1 833 MYB-Related Transcription Factor Family AT1G09770 75.329 0.0 1230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g03009 Myb_Cef 4.5e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g03009 K12860 - qsa:O6P43_011261 1467.21