Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g03001 ATGCATTCTACAACATTCATTCCTCATTCCCAGGAAAATGATGAAATTTCCTGGGGACCAGATCCGCTTCAGGATATTCTTGATTTTCCCGAAACTGCTTCTGTCCAGAACGATCAGTTGGAAAATAGTTCTTGTTACATACCTGATGACAATACTAAGAAAACTGATCTTGTGGAATGGGTTGATCAGTTAATGTCAGTTGATGATTCTCTACACCAAAATTGGAGTCAGCTTCTTGGTGATGATGATGTAGCAGATTCAAAAGCAGAGGAGTCCCAGGTTTCCCAGCAGCAGCATGTACCATCTGAAGAAGTTAATGCCCTTAATAATTTGGTGTCAACTGCGCCACAAACTAAGCCAAGAATGCGTTGGACTCCAGAACTTCATGACTCCTTCGTCGAAGCAGTTAATCAGCTCGGTGGCAGTGAGAAGGCTACTCCTAAGGGTGTCTTGAACCTGATGAAAGTCAAGGGCCTTACCATATATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAGTCATCCGAAGGAACTTCTGAGAAAAAGTTGACATCAATTGAAGAAATGAAATCTCTAGACTTGAAAACGAGTATGGGGATCACTGAAGCCCTGCGGTTGCAAATGGAATTACAAAAACGACTTCACGAGCAACTTGAGATTCAAAGGAAATTGCAGATTCAGATTGAGAACCAAGGCAAGCGTCTTCAGATGATGTTTGAGAGCCAAAGAGAAATGGAGGAGGGCAAGCTCAAGGGGTCCTCCTCCTTGGATGAGCCTTCTGCACCCTTATCAAACAAGGTTGAAAATTCAGAAATGTCAAATGAGGAACATGACAAATCAGGAACTGAAGGAAGTTCCCGGGGTGGAAGCACAAAGCTAAAAGATGATGACAACAAGGTTGGACAGGCGTTGGGAGAAGATCGGTTTAAGGGACCGCCCACAAAACGTGTTAGAAGTTGA 978 0.4335 MHSTTFIPHSQENDEISWGPDPLQDILDFPETASVQNDQLENSSCYIPDDNTKKTDLVEWVDQLMSVDDSLHQNWSQLLGDDDVADSKAEESQVSQQQHVPSEEVNALNNLVSTAPQTKPRMRWTPELHDSFVEAVNQLGGSEKATPKGVLNLMKVKGLTIYHVKSHLQKYRTARYKPESSEGTSEKKLTSIEEMKSLDLKTSMGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFESQREMEEGKLKGSSSLDEPSAPLSNKVENSEMSNEEHDKSGTEGSSRGGSTKLKDDDNKVGQALGEDRFKGPPTKRVRS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g03001 325 MobiDBLite consensus disorder prediction 1 21 - -
Accr5g03001 325 Pfam Myb-like DNA-binding domain 121 172 IPR001005 -
Accr5g03001 325 SUPERFAMILY Homeodomain-like 117 173 IPR009057 -
Accr5g03001 325 MobiDBLite consensus disorder prediction 249 325 - -
Accr5g03001 325 NCBIfam myb-like DNA-binding domain, SHAQKYF class 119 173 IPR006447 GO:0003677
Accr5g03001 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 92 284 IPR044848 GO:0003700
Accr5g03001 325 Pfam MYB-CC type transfactor, LHEQLE motif 204 250 IPR025756 -
Accr5g03001 325 FunFam Myb family transcription factor 118 176 - -
Accr5g03001 325 Gene3D - 118 177 - -
Accr5g03001 325 MobiDBLite consensus disorder prediction 276 325 - -
Accr5g03001 325 Coils Coil 207 227 - -
Accr5g03001 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 176 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g03001 Accr-Chr5 55453415 55455716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g03001 2 306 G2-like Transcription Factor Family AT3G04450 47.590 1.01e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr5g03001 Myb_DNA-binding 3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g03001 - - gmx:100803267 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g03001 5 55453415 55455716 Accr5g02435 5 50759857 50762951 CCT
Accr5g03001 5 55453415 55455716 Accr5g03001 5 55453415 55455716 ECH