LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr5g02987	ATGATCCACAACATACGCCTCCATGTATTCCTCTCTGTCCTCTGTCTCTCCCCTGCCTTCAATGCCCTTCTGGCAAGAAGCCAAAGCCCGTCATCGTCGTCGTTGATGCTGGGATGTGGCTTGGCCGATGGCGGAGGCAAAGACTCAGACGGAAGGCAATGGAACCCCGATAACAAGTACCTATCGGGAGGCGATTCCAACGCGTTCAGAGCCTCCTACCAAGATCCTTCGCTCTCGTCCGAGGTTCCATACATGACAGCTCGTGTTTTCACGTCCGAGGCCACCTACAAATTTCCCATCAGTCCCGATAAACGTTATTGGCTGAGGCTACACTTTTACCCCTCCGTCTATTCAAATTTCGATCCTGCCAATTCATATTTCTCGGTCACCGCAAATGGCCTCACCCTCTTGAGCAATTTCAGCGCCTCTATTACCTGCCAAGCCCTCTCCCAGGCTTACATCGACAGAGAATATTCCCTTGCCCCTCTCACCTCTGATTTTCTCACCCTTACATTCAAGCCTTCCCACGAGTACAACGGCTCTTTCGCTTTCGTGAATGGCATCCAACTTATGGAAATGCCAAACTTGTTTGATTCTTCGGCCACGCTGGTGGGTTTCAACCAACTCATGGACGCCACAAGCCTGCATTCGCAGGCAATGTTCAGACTCAATGTTGGAGGACAATACATATCGCCAACCCAAGACTCTAATCTCAGCAGAACGTGGTACGACGACACGCCGTATCTTTACGGCGCATCCACGGGTGTGACCACCGAAGCAAACAAGACCGTCCAAATCAACTACCAAAGCATGCCACAATACATTGCTCCTTCTACTGTCTACTCCACGTCGAGATCCATGGGAAGCGACAAGGATGTGACACTGGCGTATAACCTCACGTGGATTTTCCAAGTGGATCCTAATTCCATGTATCTCACAAGGTTACACTTTTGCGATTACACATTTGACAAAAGCAACGAAATAGCCTTCAACATATATTTGAACAATCAAACGGCGCAGTCAGGGGCGGATGTGATTGGATGGACGAGTGGGAGAGGCGTGCCCACTTACAAGGACTACGTAGTATATGCTCAGGATGGGCCCGGCGCCGACCAACTCTGGCTTGCTCTCCACCCTGCTACTGAGACGAAGCCTGAATACTATGATGCAATTCTGAACGGGATTGAGATATTCAAGCTCAACGATACAACGTTGGCGGGACCCAATCCTCAGCCTTCGGACATGCTAATGAAGGCAGAGGAGCAGCAGCAAAAATCTTTCCAAAACAAGGATCAACAGAGTACTCATCCGGCTATAATTGGAGGGGCTGCAGGAGGGGCTGCTTTACTAGCTGCATTGTGCATTGCAGTTTACCAGAGGCAAAAGAGAGTCCCAGGATCAGAGCCACACACTTCAAGCTGGCTTCCACTCTATGGGAATACCCAAAGTTCCGGTAAATCCACTCTTTCTGGGAGGAGCGCCGGCGGTGTTACCTTGTCTGCCACGGCACAAGGCCTTTGCAGGTACTTCTCTTTGCCGGAGATAAAGCACGCGACCAAGAACTTCGATGAGTCCAATGTTATTGGGGTTGGAGGATTCGGTAAGGTGTATAAAGGTGTGATTGATAATGGGATTAAAGTGGCTATCAAGAGGTCCAATCCTGAATCGGAACAAGGTGTCAGTGAATTCCAGACTGAGATTGAGATGCTTTCCAAGCTCAGGCACAAGCATTTGGTCTCGTTGATTGGGTTTTGTGAGGAGGACAATGAAATGTGTCTGGTTTATGACTACATGGCTCATGGCACTTTAAGGGAACATATTTACAAGGGAAACAAGTCTTTGAACGCCCTGTCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCCAGAGGACTTCACTACCTTCACACCGGAGCTAGGTACACCATTATTCATAGGGATGTGAAAACAACTAACATTCTTCTAGATGAAAACTGGGTCGCCAAGGTTTCAGACTTCGGCCTCTCCAAAACTGGTCCCAACATGAATAACGGCCACGTCAGCACAGTGGTCAAGGGCAGCTTTGGATACTTGGATCCTGAATATTTCAGGAGACAACAACTGACCGAGAAATCTGATGTGTACTCATTTGGGGTTGTCCTGTTTGAGGCACTCTGTGCGAGGCCTGCTCTGAATCCTAGCCTCTCCAAGGAACAGGTGAGTCTGGCGGATTGGGCTCTAACCAACAAAAGAAGAGGAACACTAGAGGACATAATAGACCCGCATCTCAGAGGAAAGATACGTCCAGAAAGCTTAAGAAAGTTTGCAGATACTGCTGAAAAGTGCCTGTCAGATCATGGAGTGCATCGTCCCACAATGAATGATCTGCTGTGGAATCTTGAACTTGCCCTGCAGCTGCAGGAAAATCCTGATGGATCAATTAAGTTGTCTTCTTCGCCTATGGATGATGCTGAGTTCGAAGAGATTAGCTTGAAGGGCAACGATATAGCAACACATTATAAGAATCTAAGCCTTGGGGGTGAGCAGGAGACGGGTGATAATTCTAATGCCATCTTCTCACAAATGGTCAGTCCAAAGGGACGATGA	2589	0.4855	MIHNIRLHVFLSVLCLSPAFNALLARSQSPSSSSLMLGCGLADGGGKDSDGRQWNPDNKYLSGGDSNAFRASYQDPSLSSEVPYMTARVFTSEATYKFPISPDKRYWLRLHFYPSVYSNFDPANSYFSVTANGLTLLSNFSASITCQALSQAYIDREYSLAPLTSDFLTLTFKPSHEYNGSFAFVNGIQLMEMPNLFDSSATLVGFNQLMDATSLHSQAMFRLNVGGQYISPTQDSNLSRTWYDDTPYLYGASTGVTTEANKTVQINYQSMPQYIAPSTVYSTSRSMGSDKDVTLAYNLTWIFQVDPNSMYLTRLHFCDYTFDKSNEIAFNIYLNNQTAQSGADVIGWTSGRGVPTYKDYVVYAQDGPGADQLWLALHPATETKPEYYDAILNGIEIFKLNDTTLAGPNPQPSDMLMKAEEQQQKSFQNKDQQSTHPAIIGGAAGGAALLAALCIAVYQRQKRVPGSEPHTSSWLPLYGNTQSSGKSTLSGRSAGGVTLSATAQGLCRYFSLPEIKHATKNFDESNVIGVGGFGKVYKGVIDNGIKVAIKRSNPESEQGVSEFQTEIEMLSKLRHKHLVSLIGFCEEDNEMCLVYDYMAHGTLREHIYKGNKSLNALSWKQRLEICIGAARGLHYLHTGARYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLSKEQVSLADWALTNKRRGTLEDIIDPHLRGKIRPESLRKFADTAEKCLSDHGVHRPTMNDLLWNLELALQLQENPDGSIKLSSSPMDDAEFEEISLKGNDIATHYKNLSLGGEQETGDNSNAIFSQMVSPKGR	862

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr5g02987	862	Gene3D	Transferase(Phosphotransferase) domain 1	598	811	-	-
	Accr5g02987	862	MobiDBLite	consensus disorder prediction	839	862	-	-
	Accr5g02987	862	FunFam	FERONIA receptor-like kinase	34	194	-	-
	Accr5g02987	862	CDD	STKc_IRAK	528	795	-	-
	Accr5g02987	862	MobiDBLite	consensus disorder prediction	839	856	-	-
	Accr5g02987	862	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	644	656	IPR008271	GO:0004672\|GO:0006468
	Accr5g02987	862	FunFam	Receptor-like protein kinase FERONIA	598	812	-	-
	Accr5g02987	862	FunFam	receptor-like protein kinase FERONIA	486	597	-	-
	Accr5g02987	862	ProSiteProfiles	Protein kinase domain profile.	522	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g02987	862	SMART	serkin_6	522	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g02987	862	PANTHER	OS07G0166700 PROTEIN	507	801	IPR045272	GO:0004714\|GO:0006468
	Accr5g02987	862	Gene3D	Phosphorylase Kinase; domain 1	498	597	-	-
	Accr5g02987	862	SUPERFAMILY	Protein kinase-like (PK-like)	500	796	IPR011009	-
	Accr5g02987	862	FunFam	FERONIA receptor-like kinase	215	401	-	-
	Accr5g02987	862	Pfam	Malectin-like domain	38	399	IPR024788	-
	Accr5g02987	862	Pfam	Protein tyrosine and serine/threonine kinase	526	791	IPR001245	GO:0004672\|GO:0006468
	Accr5g02987	862	ProSitePatterns	Protein kinases ATP-binding region signature.	528	550	IPR017441	GO:0005524
	Accr5g02987	862	Gene3D	-	215	401	-	-
	Accr5g02987	862	Gene3D	-	38	194	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr5g02987	Accr-Chr5	55363440	55366028	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr5g02987	23	862	Receptor kinase-like Gene Family	AT3G51550	51.864	0.0	844

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Accr5g02987		Malectin_like	3.8e-37	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr5g02987	-		-	gmx:100791236	1252.27