Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02981 ATGGATAGGGTGTTTTCAGTGGATGAAATCTCCGACCAGTTCTGGTCATCGCCGATGTCGACCGGAGCCCATGAACCCTCCAAGATGAACCGTAGCGCCTCCGAGTGGGCGTTCCAGCGATTCCTTCAGGAGGCTTCTGTACCCTCCCCGAACTCTCCGGCTTCTTCCTCCCTCCCTCTTCACCCTAACGATGGCCGTCCGCTTCACGTCAAGGATCAACCCAAACAGGATCCCGCTCCGAATACGGGAGTCACGCCGCTTCAGAACAGTGGTCCCGTCCAGGCCAATGTTCCTTCTCCCCCTCCCTCTATTCCTAACACTCCCGTTAATTCCGATGACTACCAGGCTTACCTCAAGAACAAACTCAATCTCGCCTGTGCCGCGGTCGCATTGTCTCGGCATGGATCTTTAATCAAAGCACAAGATTCAGCTACTTTTGTTGACAGTGGATCGCAGGCTTCTAATTCTTCTAAAGTTGGAGCTCAGGCTACTTTTAAAGGATCTGGCGTGTCTGGTCCATCTGGAAGTGATCCATCTAAATTACTGGATAAAGATACCAAAGCACCCGTTGGAATTCCTTCCTTACCTGTGATTCAAAAGAAGCCTGCTGTTGCAAACAAGCCAACAACAAGCGGATCATCAAGGGACTTGTCAGATGATGATGACATTGAGGGAGAAACTGAGATGACTGAAAATATGGACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAATCTGCTAGACGTTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTTGAGACACAGGTTTCTCAATTAAGAGTTGAAAATTCATCCTTGTTAAAGCGTCTTACTGATGTAAGCCAGAAGTACAATGAATCTGGTGTTGACAACAGGGTGCTAAAAGCTGACATTGAAACACTAAGAGCAAAGGTGAAGATGGCTGAAGAGAATGTCAAAAGAATTACTGGATTGAACCCAATGTTTCATGCCATGTCCGAGATATCATCAATGGGAATCTCTTCATTTGATGGAACCCCTCCAGACACGTCAGCGGATGCAGCTGTTCCCATGCAAGATGATCCAATCCATCACTTTTATCAACCTACAAATACTCCTTTGTCCAGTCATGATCTGAGAGTGAACAATGGATTGGGGGATGTTGGTTCAAATGAAAATGTTCAGCAGGGCAGGGCAGCTGTGGTAGCTGGAAACAAGATGGGACAGGCAGTTTCCCTTCAGAGGGTGGCTAGCTTGGAACATCTGCAGAAGAGAATTTGTGGTGGTGCAGATTCATCTGGACCTTCTTCCAGTGGAGATCATTAG 1323 0.4739 MDRVFSVDEISDQFWSSPMSTGAHEPSKMNRSASEWAFQRFLQEASVPSPNSPASSSLPLHPNDGRPLHVKDQPKQDPAPNTGVTPLQNSGPVQANVPSPPPSIPNTPVNSDDYQAYLKNKLNLACAAVALSRHGSLIKAQDSATFVDSGSQASNSSKVGAQATFKGSGVSGPSGSDPSKLLDKDTKAPVGIPSLPVIQKKPAVANKPTTSGSSRDLSDDDDIEGETEMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDVSQKYNESGVDNRVLKADIETLRAKVKMAEENVKRITGLNPMFHAMSEISSMGISSFDGTPPDTSADAAVPMQDDPIHHFYQPTNTPLSSHDLRVNNGLGDVGSNENVQQGRAAVVAGNKMGQAVSLQRVASLEHLQKRICGGADSSGPSSSGDH 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02981 440 MobiDBLite consensus disorder prediction 10 59 - -
Accr5g02981 440 MobiDBLite consensus disorder prediction 1 111 - -
Accr5g02981 440 PANTHER BASIC LEUCINE ZIPPER 63 1 429 - -
Accr5g02981 440 Coils Coil 297 324 - -
Accr5g02981 440 Pfam bZIP transcription factor 238 290 IPR004827 GO:0003700|GO:0006355
Accr5g02981 440 MobiDBLite consensus disorder prediction 78 94 - -
Accr5g02981 440 Gene3D - 238 293 - -
Accr5g02981 440 SMART brlzneu 235 299 IPR004827 GO:0003700|GO:0006355
Accr5g02981 440 MobiDBLite consensus disorder prediction 148 230 - -
Accr5g02981 440 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 237 292 IPR004827 GO:0003700|GO:0006355
Accr5g02981 440 MobiDBLite consensus disorder prediction 148 175 - -
Accr5g02981 440 Coils Coil 248 282 - -
Accr5g02981 440 CDD bZIP_plant_GBF1 240 291 IPR045314 GO:0003700|GO:0006355
Accr5g02981 440 Pfam Basic leucine-zipper C terminal 306 429 IPR020983 -
Accr5g02981 440 SUPERFAMILY Leucine zipper domain 239 289 IPR046347 GO:0003700|GO:0006355
Accr5g02981 440 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 242 257 IPR004827 GO:0003700|GO:0006355
Accr5g02981 440 FunFam BZIP transcription factor 237 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02981 Accr-Chr5 55308690 55311607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02981 1 328 bZIP Transcription Factor Family AT4G02640 40.762 9.29e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr5g02981 bZIP_C 1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02981 K25784 - qsa:O6P43_007630 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02981 5 55308690 55311607 Accr5g02981 5 55308690 55311607 CCT
Accr5g02981 5 55308690 55311607 Accr5g02981 5 55308690 55311607 ECH