Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02976 ATGGAGAGGGCGAGCAAATGGATAAGAAGCCATCTTATGGGGAAAAAGGAAGAAAAACGTAAGGAGGAGAGGTCGTGCATGGTGAACAACATTGCTGAAAATCCCAGAACAAAGCGCAGATGGAGCTTTGGAAGAAGGTCAAGCGCCAGAATAACAGGAAACACATCTATGCGTAGATGTTCCACTTCTTTTGATTCAAGCCACTCTGCTAACCTCCAAATACAATCGCTCCTGCGTTGTGAAGCTCCATATAGTTTTTCAACTCCTCTACTGTCAAAGGCTCCCAGAGACATTCAAAGCGCTGCTGCTACCCAGATTCAGGCCGCTTTTCGCTCCTATTTGGCGAGGAAAGCGTTGCATGCTTTGAAGGGACTAGTGAAGATACAGGCACTAGTGAGAGGCCATCTTGTAAGGAAACAAACAAGTGCTACATTTCGAGGCTTGCATGCCTTGATGGCTATCCAAGTAAGAGCCAGAATTCACAGACTTCAGGCCGCGCAAGAAGCTAACCTGCTGCTTACAAAACACTCATCCCGACATCCACGAATTCCTCGAGATAAACATCTCCTGAGAGAATCCAAAGACTCAAAGGATATGTACCTAGAAGACATGCAGGAAATTATGGAAAGCAGAAGCGGTCCTCTAGATTCTACATATACAGAGCATGTTGCCATGTCATTCTATTCAAAGCAAAAGTATCAATACAAGGATAATGCTTTTACCGCAGAACAAAGCAGCTCGGGAAACAACTTATCATGTAGCCAGCGCCATTCAATGTCACAGGCACCCAATGAGCTCACCAGGGCAGAACCTTCGAGGGCTAAAGCTAGGTCTTGCAGTGAACCAAAACAACGACCCGCTCAAGGTACGAGGCGCAAAAGCAAGTCCATAGAATCTACGAAGGACTTGATTTTTCCTTTGGATTTGGATGGTCGAAGGCAGTCTATGTCATCAAACTCCTCACGCTTTATCTACCCCAGAAACCTGGATCATTGGGTTATGAACCATTACGAGTCATCCACGGACAGCAAAAACGAGTCCTTCAGCACCAGCTTGGGCATGGCGAGTAATGGTTCTTATTATTGA 1086 0.4586 MERASKWIRSHLMGKKEEKRKEERSCMVNNIAENPRTKRRWSFGRRSSARITGNTSMRRCSTSFDSSHSANLQIQSLLRCEAPYSFSTPLLSKAPRDIQSAAATQIQAAFRSYLARKALHALKGLVKIQALVRGHLVRKQTSATFRGLHALMAIQVRARIHRLQAAQEANLLLTKHSSRHPRIPRDKHLLRESKDSKDMYLEDMQEIMESRSGPLDSTYTEHVAMSFYSKQKYQYKDNAFTAEQSSSGNNLSCSQRHSMSQAPNELTRAEPSRAKARSCSEPKQRPAQGTRRKSKSIESTKDLIFPLDLDGRRQSMSSNSSRFIYPRNLDHWVMNHYESSTDSKNESFSTSLGMASNGSYY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02976 361 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Accr5g02976 361 Pfam IQ calmodulin-binding motif 126 140 IPR000048 GO:0005515
Accr5g02976 361 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Accr5g02976 361 SMART iq_5 121 142 IPR000048 GO:0005515
Accr5g02976 361 SMART iq_5 98 120 IPR000048 GO:0005515
Accr5g02976 361 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Accr5g02976 361 MobiDBLite consensus disorder prediction 270 299 - -
Accr5g02976 361 PANTHER IQ-DOMAIN 5-RELATED 1 299 - -
Accr5g02976 361 MobiDBLite consensus disorder prediction 244 299 - -
Accr5g02976 361 MobiDBLite consensus disorder prediction 244 267 - -
Accr5g02976 361 Gene3D - 97 150 - -
Accr5g02976 361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 141 IPR027417 -
Accr5g02976 361 MobiDBLite consensus disorder prediction 340 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02976 Accr-Chr5 55207596 55208895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02976 1 322 IQD Protein Family AT4G14750 33.051 1.88e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02976 - - pcin:129305208 468.774