Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02973 ATGTTCGATAGAGTGCCCGAACAGTTCCACCAATTCATAGCCCCAAGAACCTCACTTCCTCTTCACCCATCCCTCCCTTCCAGCTTCGATGCTTACAACACTTCTCATCATCACTTGCCCCTCCCGCCGCCGCTGCCGCCGCCAAATCTCCTGCCCCCATTGCACCTCAAAGACGAACAACACGAGCAGCAACAAACTAGCATGAACTTCGAGATTAATGAAAGAGAACCCCGATTGGGCGAGCATGAGCTGATTATTGATTCCACCAGCTGGACCGACGATGAGGTGCTTGCTCTTTTGAGGATCAGATCTGACCTCGACAATTGGTTCCCTGAACTCACTTGGGAACATGTTTCAAGGAAGCTTGCAGAGCTTGGATTTAAAAGGTGTGCAGAGAAGTGCAAGGAGAAGTTCGAAGAAGAAACCAGTTACTTGACCAACATCCATTACACCAAGAACAACGGTTACCGCTTTATTAGTGAGCTCGAACAGCTTTACCAACAACAAGAAGCACATCAAATCGCTGGGATGGAGGTGGAGGTTGAGGTTGGGTCTCAAGAGAGTAAGCAGCAGCCGGAAAAACCGGCTGAGGAACAACGAGGGAAGATGGATCACGCATTATTAGAAGATGGCTCAGCAAATGACGACGCCGACGCATCATTGACCAAAAAATGTGAGGAAACTGTGAAGATGGCGGGGACGTCAAAGCGCAAGAAGCGAAAGAGGAACGATAAGTTTGAGATTTTGAAGGGTTTTTGTGAGAACATGGTGAACAAAATGATGGCAAAGCAAGAACAGATGCACAATAAGCTGCTGGAGGACATGATTAAAAGAGACCAAGACATATTCGCGAGACAGGAGGCTTGGAAGAAACAGGAGATGGATGGCATGAACTGGGAGCTCGAAATGATGGCGAAAGAGCAGGCTGTTGCGGGTCAAAGGCAAGCCGCCATTGTTGATTTGTTGAAGAAAATGTCAGAGCAGAGCCAATATTATTGTACCAAAAGGGTATCATCAGACGATCCCATTAATCCAAATTCTCTGCAGGCTGCTTCCCCGTCAAACTCACAAAACCCTAATCCATGTAGTAATTATACCGGGGAGAACAATACCGAGCCGCCGTCACGCGTGGTTCATAATTGTACGAGCGAAGGCGCATCGGATAAAAAACCTGATAGTTCAAGCGAAGTTCCTAATCCCTCTTCAAATGATTGCGATGATCCAACCGCAGCAGTTAATACCCGGAAACCTAATTCTGTGAATGCACAGTCAGATGGAGTGCCCGGAAAAACAGGTACGACGCAGAAAGGGGGGTCATATAAGTGTATGAGGAGAGAGAAAGAAGAGGTGGGTAGAAGATGGCCAAGAGAGGAAGTAGTGGCACTGATAAACCTGAGAAGCAGTGCGAACGAAGAGAGAGAAGGAGGAGGGAGCAGCAGCAGGGTTCCTCTGTGGGAGAGAATATCGGAAGGGATGAGGGAAATGGGATACAACAGAAGCGCCAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAGGAAGACGAAGCATCTGAGCCAGCAGCTTTGA 1578 0.4785 MFDRVPEQFHQFIAPRTSLPLHPSLPSSFDAYNTSHHHLPLPPPLPPPNLLPPLHLKDEQHEQQQTSMNFEINEREPRLGEHELIIDSTSWTDDEVLALLRIRSDLDNWFPELTWEHVSRKLAELGFKRCAEKCKEKFEEETSYLTNIHYTKNNGYRFISELEQLYQQQEAHQIAGMEVEVEVGSQESKQQPEKPAEEQRGKMDHALLEDGSANDDADASLTKKCEETVKMAGTSKRKKRKRNDKFEILKGFCENMVNKMMAKQEQMHNKLLEDMIKRDQDIFARQEAWKKQEMDGMNWELEMMAKEQAVAGQRQAAIVDLLKKMSEQSQYYCTKRVSSDDPINPNSLQAASPSNSQNPNPCSNYTGENNTEPPSRVVHNCTSEGASDKKPDSSSEVPNPSSNDCDDPTAAVNTRKPNSVNAQSDGVPGKTGTTQKGGSYKCMRREKEEVGRRWPREEVVALINLRSSANEEREGGGSSSRVPLWERISEGMREMGYNRSAKRCKEKWENINKYFRKTKHLSQQL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02973 525 MobiDBLite consensus disorder prediction 336 438 - -
Accr5g02973 525 MobiDBLite consensus disorder prediction 180 200 - -
Accr5g02973 525 CDD GT1 452 519 - -
Accr5g02973 525 FunFam Trihelix transcription factor GT-2 91 147 - -
Accr5g02973 525 PANTHER FI21293P1 62 520 - -
Accr5g02973 525 SMART sant 87 144 IPR001005 -
Accr5g02973 525 SMART sant 450 514 IPR001005 -
Accr5g02973 525 Gene3D - 91 145 - -
Accr5g02973 525 Gene3D - 454 517 - -
Accr5g02973 525 MobiDBLite consensus disorder prediction 336 382 - -
Accr5g02973 525 Pfam Myb/SANT-like DNA-binding domain 452 520 IPR044822 -
Accr5g02973 525 Pfam Myb/SANT-like DNA-binding domain 89 144 IPR044822 -
Accr5g02973 525 ProSiteProfiles Myb-like domain profile. 453 512 IPR001005 -
Accr5g02973 525 MobiDBLite consensus disorder prediction 392 438 - -
Accr5g02973 525 ProSiteProfiles Myb-like domain profile. 90 142 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02973 Accr-Chr5 55184997 55187123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02973 1 524 Trihelix Transcription Factor Family AT5G28300 33.557 2.99e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr5g02973 Myb_DNA-bind_4 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02973 - - pcin:129307148 510.76