Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02956 ATGGCTCAACCATATACTTCAGATCTAGTGTTTACTGTGAGGAGACGTCGACCAGAACTAATTCCTCCAGCTAAGCCCACCCCTCATGAAGTTAAGCCACTCTCCGATATAGATGACCAAGATGGTCTCCGATGTCGACTTCCGATGGTTCACTTTTATCCTTACCACCCATCCATGCAAGGAAACGACCCTGCTCAACTTATCAAAAGCGCACTTGCTCAAGCCCTAGTCTTTTATTATCCCCTCGCCGGTCGTCTCAGGGAAGGTCCTGGTCGCAAACTTATGGTGGATTGTAGCGAGCAAGGTGTCCCCTTCATTGAAGCTGACGCAGATGTCACTCTTCACCAGTTCGGCGACCCTATTAAACCTCCATTTCCATGCTTCGAAGAGCTCCTTTATACTGTTCCTGACACAGATGGAATTATTGACTGTCCCCTCTTAGCTTTTCAGGTTACCCGTCTCAAGTGTGGTGGTTTCATTTTGGCATACTTCTTAAACCACACTATGTGTGACGGTCCTGGTTTAGTTCAATTCTTAGGAGCTTTAGCGGAGATTGCCAGGGGTGCTAATGAGCCTTCAGTTGCCCCAATTTGGCGCAGAGAGCTACTGAATGCAAGGGACCCACCTCGCATCACATGCACCCATAATGAGTACGTGGAAGTGCCTGATGATGATACAAAAACAGAGATGACAGAAGCTATGTCCCAAGACTCTTTCTTCTTCGGGCCTGACGAGTTGAAGGTCATCCGTCCACTGTTTTCTCAGTACCATGGTCAACACACTACATTCGAAATGTTGACCGCATTCCTCTGGCGTTGTCGCACCATATCATTAGAGCTAGAACCACACCAGGAGGTTCGCCTAATGCTTATCAGCAATTTAAGGGGCAAAACAGACCCTCGATTGTTGCCACATGGCTATTACGGCAATGGCTTTGTGTACCCCGCCTCTGTCACCACCGCAGGGGAGCTTTCTGGAAATCCACTTGGCTATGCCTTGAAGTTGGTTAAAGAGGCTAAAGGTGAGGCCACGGCCGAGTATATGCAATCCGTGGCGGATCTTATGGTGATCAGAGGACGGCCTTGCTTCACGCCGGTGAGGTCATGGGTTGTGTCGAATTTAATACATTCTGGGTTTGGAGATTTAGATTTTGGATGGGGCAAAGCAATGTACGCTGGACCCGCAATGGCTGGGATTGGCTCGTTTCCTGGAGTAAGCTGGGCATGTGGAAGTGCGAAAGGAGACGGTGTGGTAGTGTTAATTTGCTTGCCGCCCAAAGCTATGAAGATTTTCGCTAGAGAGATTGATAACTTGCTCGGCAACCATAACAACACTGGTCAGTATTCTAAATTTTTCGCGTCTTGCCTATAG 1371 0.4836 MAQPYTSDLVFTVRRRRPELIPPAKPTPHEVKPLSDIDDQDGLRCRLPMVHFYPYHPSMQGNDPAQLIKSALAQALVFYYPLAGRLREGPGRKLMVDCSEQGVPFIEADADVTLHQFGDPIKPPFPCFEELLYTVPDTDGIIDCPLLAFQVTRLKCGGFILAYFLNHTMCDGPGLVQFLGALAEIARGANEPSVAPIWRRELLNARDPPRITCTHNEYVEVPDDDTKTEMTEAMSQDSFFFGPDELKVIRPLFSQYHGQHTTFEMLTAFLWRCRTISLELEPHQEVRLMLISNLRGKTDPRLLPHGYYGNGFVYPASVTTAGELSGNPLGYALKLVKEAKGEATAEYMQSVADLMVIRGRPCFTPVRSWVVSNLIHSGFGDLDFGWGKAMYAGPAMAGIGSFPGVSWACGSAKGDGVVVLICLPPKAMKIFAREIDNLLGNHNNTGQYSKFFASCL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02956 456 Pfam Transferase family 13 435 - -
Accr5g02956 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 431 - -
Accr5g02956 456 Gene3D - 9 216 IPR023213 -
Accr5g02956 456 Gene3D - 217 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02956 Accr-Chr5 55026827 55028294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02956 44 433 Monolignol Biosynthesis Gene Families AT5G48930 30.993 5.03e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02956 K19861 - gmx:100797017 540.421