Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02950 ATGCAGCGGAAGAAAGTCAGAACTGAAATGAAGAACATTTTCAAGAGGCTTCACATTGGCAACAATCACGATCCTAATCGATCCCATGAAGCTTCTCCTTCCTCCTCCTCCGCAGTAAACTCACAATCTGGCGTCTCCGATCTCTGTATCACCCCTCCTGTTCAGAATTCCGGTACTTCTATGCCCAGCCCCCCTTCTTCTTCACCATCGCCTTCCCCTGCTCCTCCAACAGCTGGCAGCAGCAGCACTTCCACTCCCCAACCTGCCCAGTCCAATTTTCAAGACTATTTCTCTTCGGAGGAAGAGTTCCAGGTTCAGTTAGCCCTAGCCATCAGCGCTTCCAATTCGGAGTTCCGGGATGATCCTGAGAAGGATCAGATCCGAGCGGCAACATTACTGAGCCTAGGAGGTCATCGAACTCATTGCGCAACGAATAAGGATCACGAAGCCGAGGCACTATCTAGGCAGTACTGGGAATACAATGTTCTTGACTATGAGGAGAGAGTGGCAGATGGTTTTTATGATGTATATAGCCTCTGTAATGATGCTGCAATGCAGAAGAAAATGCCATCTCTGGCGGATCTCGAAGGAAATCCTGGAAGTTCTAATTTTGAAATTGTCGTGGTTAATAGAAAGATTGATACCGTCTTGGAAGAGCTGTTGCAAATTGCCCATTGCATTGCATTAGACTGCCCAGTCACCAAGGTCGGTGTTTTGGTACAAAGGCTTGCTGAACTTGTTACGGGGCATATGGGTGGTCCGGTAAAGGATGCTAATATGGCATTGGCGAAATGGATGGAAAGAAGTACGGAGCTAAGAACATCCCTTCACACAAGTGTATTGCCTCTTGGGTCCATAAATATTGGGCTATCCAGGCATCGGGCTTTGCTTTTCAAGGTATTAGCTGACAATATCAAGATGCCTTGTAGGCTGGTAAAAGGCAGTCATTACACTGGTGTTGAGGATGATGCTGTGAACATAATAAAGTTGGATGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGACTTAAGTGCAAAGGATACTGCCTTTAAGTCATACAACCCCAAGATTTTGCCAAGTTTACAATCCAGTAAAGAAAGTGGATTTTCTTACTCAGGACAAATATCATCTGATGGTGAAGGAAGTAGTCATTTTTCTGTGAAAAGAGGTGGTTCATCACCATTGACTGGAAAATTATCTTTTGAGGGGTCAGAAATGTCTTCAGAAACAAGCTCAAGCAAAGACACTGGTGCTATTGCTTCCAAAATGCCCGATAGAGCAACTTCCAGCCAACCACAAAAATTGCCCCCATCAGCTGGCACTTTGCTGTACAAAGGGACTCTCGGAATGAATGCAATTGGTGATGGGACAAGATTGAATGCCAATATTGTACCCTATAGTCAGGATAGCCCAGACAACTCGAGGATCCTTTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACTGGCAAAACCTCTGTACACAACAAGCCTGTGGAAAATAAGTCTCCTGAGCTTCAAATTATGAGAGATAATTCTGTCTCTGGCCAACCCCGAGCACCATTGATGTGGAAGAATTGTTATGCTTACAATGACACTCCCAAAAAGATCAACCGTGATCCTAGTGAATATAGTTCCCAGTCGTCACATAATTCTAATATAAATAAAAAGAGAAATACTCTCAATTTGATGGAAGTTACTGGTTCAGCATTGGCACCTGGTGCAGGTGAGCTAAACAGGGTTGAGGATCTCAAAGAGGACTGTAACAAAAGAAACGGAGTAAGTTTTGAAAATGACATGGTAGGTGTGGCTAAAGAACATGAGAACAATGAAATTAAGTTTCATGACCGGAGAAAGTGCACACATGACAGATTCATGGGGAGCAATTTGAAATTAGAGGCCTCAGAGCGTCCAAGCTCACCAATTGATTCCATTGCTATAGGGGGTGATCAAATATTGGATGATGTAGATGTGGGTGATTGTGAAATTCCATGGGAGGATTTGATTATTGGTGAAAGAATAGGTCTAGGTTCATATGGTGAGGTATTCCGTGCTGACTGGAATGGCACTGAGGTTGCTGTTAAGAAGTTTCTGGATCAAGACTTTTCTGGCGCTGCACTGGCTGAATTCAAGAGAGAAGTACGGATCATGCGTCGATTGCGCCATCCAAATATTGTTCTTTTTATGGGTGCTGTCACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTTTCTTCCAAGAGGAAGCTTGTACAAAATTCTTCATCGTCCTAATTGTCAGATTGATGAGAAGCGTAGAATAAAAATGGCTTTGGATGTGGCAAGAGGCATGAACTGCTTGCACACCAGCATGCCTACAATTGTTCACCGAGATCTGAAGTCACCAAATCTTTTGGTTGATAATAACTGGAATGTCAAGGTTTGTGATTTTGGGTTATCACGCTTGAAGCACAGCACATTTTTGTCATCCAAGTCAACGGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAACGAGCCCTCAAATGAGAAGTGTGACGTTTATAGTTTTGGAGTCATCCTTTGGGAGCTTGCCACTTTGAGGTTGCCGTGGAGTGGAATGAACCCTATGCAGGTTGTAGGTGCAGTTGGTTTCCAAAACCGTCGCCTAGAAATCCCCAAGGAAATTGACCCCGTTGTTACAAGAATAATTTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCGTCGTTTGCGCAGCTCACTGTGGTTTTAAAGTCCCTGCAGCGTTTAGCTATCCCATCTTATCAAGACCAGATGGCTTCGCCTCTGCCACAGGAGATTTCTGTGAATTCCACCCCTTAG 2877 0.4449 MQRKKVRTEMKNIFKRLHIGNNHDPNRSHEASPSSSSAVNSQSGVSDLCITPPVQNSGTSMPSPPSSSPSPSPAPPTAGSSSTSTPQPAQSNFQDYFSSEEEFQVQLALAISASNSEFRDDPEKDQIRAATLLSLGGHRTHCATNKDHEAEALSRQYWEYNVLDYEERVADGFYDVYSLCNDAAMQKKMPSLADLEGNPGSSNFEIVVVNRKIDTVLEELLQIAHCIALDCPVTKVGVLVQRLAELVTGHMGGPVKDANMALAKWMERSTELRTSLHTSVLPLGSINIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADLSAKDTAFKSYNPKILPSLQSSKESGFSYSGQISSDGEGSSHFSVKRGGSSPLTGKLSFEGSEMSSETSSSKDTGAIASKMPDRATSSQPQKLPPSAGTLLYKGTLGMNAIGDGTRLNANIVPYSQDSPDNSRILFADLNPFQIKGTGKTSVHNKPVENKSPELQIMRDNSVSGQPRAPLMWKNCYAYNDTPKKINRDPSEYSSQSSHNSNINKKRNTLNLMEVTGSALAPGAGELNRVEDLKEDCNKRNGVSFENDMVGVAKEHENNEIKFHDRRKCTHDRFMGSNLKLEASERPSSPIDSIAIGGDQILDDVDVGDCEIPWEDLIIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEFLPRGSLYKILHRPNCQIDEKRRIKMALDVARGMNCLHTSMPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEIDPVVTRIIWECWQQDPNLRPSFAQLTVVLKSLQRLAIPSYQDQMASPLPQEISVNSTP 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02950 958 Gene3D Phosphorylase Kinase; domain 1 670 754 - -
Accr5g02950 958 MobiDBLite consensus disorder prediction 77 92 - -
Accr5g02950 958 Pfam Ethylene-responsive protein kinase Le-CTR1 150 348 - -
Accr5g02950 958 SUPERFAMILY Protein kinase-like (PK-like) 667 950 IPR011009 -
Accr5g02950 958 MobiDBLite consensus disorder prediction 547 567 - -
Accr5g02950 958 Pfam Protein tyrosine and serine/threonine kinase 678 927 IPR001245 GO:0004672|GO:0006468
Accr5g02950 958 ProSiteProfiles Protein kinase domain profile. 677 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02950 958 FunFam Serine/threonine-protein kinase isoform 1 668 755 - -
Accr5g02950 958 MobiDBLite consensus disorder prediction 378 447 - -
Accr5g02950 958 PRINTS Tyrosine kinase catalytic domain signature 837 847 IPR001245 GO:0004672|GO:0006468
Accr5g02950 958 PRINTS Tyrosine kinase catalytic domain signature 790 808 IPR001245 GO:0004672|GO:0006468
Accr5g02950 958 PRINTS Tyrosine kinase catalytic domain signature 856 878 IPR001245 GO:0004672|GO:0006468
Accr5g02950 958 PRINTS Tyrosine kinase catalytic domain signature 900 922 IPR001245 GO:0004672|GO:0006468
Accr5g02950 958 PRINTS Tyrosine kinase catalytic domain signature 751 764 IPR001245 GO:0004672|GO:0006468
Accr5g02950 958 CDD STKc_MAP3K-like 683 929 - -
Accr5g02950 958 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 39 932 - -
Accr5g02950 958 MobiDBLite consensus disorder prediction 1 92 - -
Accr5g02950 958 MobiDBLite consensus disorder prediction 378 399 - -
Accr5g02950 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Accr5g02950 958 MobiDBLite consensus disorder prediction 406 446 - -
Accr5g02950 958 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Accr5g02950 958 Gene3D Transferase(Phosphotransferase) domain 1 756 939 - -
Accr5g02950 958 SMART serkin_6 677 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02950 958 FunFam PAS domain-containing protein tyrosine kinase family protein 755 946 - -
Accr5g02950 958 MobiDBLite consensus disorder prediction 549 567 - -
Accr5g02950 958 MobiDBLite consensus disorder prediction 26 63 - -
Accr5g02950 958 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02950 Accr-Chr5 54942774 54949215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02950 10 913 MAP Kinase Kinase Kinase AT1G08720 55.319 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Accr5g02950 PK_Tyr_Ser-Thr 5.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02950 - - pcin:129307411 1607.42