Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02948 ATGTTCATTTCTAGTGAAGAGCAGATTCTGTTCCATTCAGAGCATGCATCAGAAAATGTCATTGAGGCTTTCAAATCAACTTCCTCGAATTTAAATCCAGATTCGGTTAATGGGTCCCTAGCAGCTGCTGAATTCCCCGATTCGCCTCCAGTTTCCACCATTTACACTGATGTTGGCGTCATTCCCGAACACGAAAAGGATGAGCAAGAGCAATTGATATCAAATCTAGAAAGAGAAGTAAAGCAGCTGAGGAACGAGCAGTGCGTATTTGATAAAAAGCGGAGAGAAGCTCTGAGCAAGATATTGGACATTAAAGGCAGCATTCGAGTATTCTGTAGGGTTCGACCCTTTTTATTACCGGAGAAGAGAATAACTTCCGAGCCAGTTTCAGCTGCATCAGAAAGGATTCGGGTTAAATTGGGAGGAACGAGGAAAGACTTTGAATTCGATAAGGTCTTCCCTCAAGAAGCAAACCAAGGAAGTGTTTTCGTAGAGGTAGAACCAGTTCTCCGATCTGCAATGGACGGACACAATGTGTGTGTTTTCGCTTATGGACAAACAGGCACTGGCAAGACATTCACAATGAATGGTACAAACGAGCACCCAGGAATAATTCCCCGTGCTCTTGAAGAGTTATTTTGTCAAGCCTCTCTAGAGAATTCATCATCCTTTACATTTTCAATGAGCATGTTAGAAGTTTACATGGGTAGTCTGAGAGATCTGCTGGCTCCGAGACCATGCAGTAAAGCCTATGAACCTGTGACAAGATGCAATCTCAACATTCAAACGGATCCAAAGGGATTGGTCGAAGTTGAGGGTCTCTCAGAAGTGCAAATATCAGGTTCTGCTAAAGCTAGATGGTGGTACGACAAAGGTAGGAGGGCAAGATCCACTTCATGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATCACCATATTCCGTCGTGGATATGCTTTGGAAGGCAAAAGTGAAATAAGCAAATTGTGGATGGTTGATCTCGGAGGAAGCGAGCGGTTACTGAAAACTGGAGCCGTAGGACTCACACTTGATGAGGGCAGGGCCATTAATCTTTCCCTTTCAGCTTTAGCTGATGTCATGGCAGCTTTGAGGAGGAAGAGGAGTCATGTGCCTTACAGAAATAGCAAGCTAACTCAGATACTCAAAGATTCTTTAGGTAATGGTTCGAAGGTCTTGATGCTTGTGCACATAAGCCCTTACGAAGAAGATGTTTGTGAGACAATGTGTTCTTTAAACTTTGCAAAGAGGGCAAGAGCAACGGAATCCAACAAAGAAATACCAGAGGAATTGAGAAGGCAAAAGGAGAAGAAGATCATGGAGCTCGAGGAAGAGATGAGGGAAGCTGAAAAGGAACACCAGAAACTACGGGATCAAATACAGAAGGCTGAGTTCAAGCTAGACGAACAGAAAAAAGTCCTCTCAACTACATATAAGCCTAAGGAAAACGACGACAGTTCCCCTATAAGCCCTAAAAATAATGTGAAAGAGGTCACTGAAACCCCAAAAGCATCTAAGAAATATGTGAAAAGCAATATATCGAATTCTATGCCTCGATTCATGACTTCCACGGTTGCCAGTCGCCAAAGGCAGAGTGCTTCGGAAAGAGAGATAGTTGGAAGATCAAGAAGTTTAAGATCAGCGATCACTAGAGGTTCCCTACAGTTTTCAGGCTCCCAATCACTGAACTGCTCAGATCTCCGATTGAAAGCAGTAATACAAAACTCAACAGGAAAATCTCGGCTTGGTGAAACCACTGAGACTCCTAAATGCAATGGTTTGGAATCAAAATCCACCCATCCTGGAAGCAGGACGATCACTTCATCGGAGCCCAACGTGGCAGTTACATTACGTCGTCATAGAAGAAGAATGTCCGATCTGATCTGA 1920 0.437 MFISSEEQILFHSEHASENVIEAFKSTSSNLNPDSVNGSLAAAEFPDSPPVSTIYTDVGVIPEHEKDEQEQLISNLEREVKQLRNEQCVFDKKRREALSKILDIKGSIRVFCRVRPFLLPEKRITSEPVSAASERIRVKLGGTRKDFEFDKVFPQEANQGSVFVEVEPVLRSAMDGHNVCVFAYGQTGTGKTFTMNGTNEHPGIIPRALEELFCQASLENSSSFTFSMSMLEVYMGSLRDLLAPRPCSKAYEPVTRCNLNIQTDPKGLVEVEGLSEVQISGSAKARWWYDKGRRARSTSWTNVNEASSRSHCLTRITIFRRGYALEGKSEISKLWMVDLGGSERLLKTGAVGLTLDEGRAINLSLSALADVMAALRRKRSHVPYRNSKLTQILKDSLGNGSKVLMLVHISPYEEDVCETMCSLNFAKRARATESNKEIPEELRRQKEKKIMELEEEMREAEKEHQKLRDQIQKAEFKLDEQKKVLSTTYKPKENDDSSPISPKNNVKEVTETPKASKKYVKSNISNSMPRFMTSTVASRQRQSASEREIVGRSRSLRSAITRGSLQFSGSQSLNCSDLRLKAVIQNSTGKSRLGETTETPKCNGLESKSTHPGSRTITSSEPNVAVTLRRHRRRMSDLI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02948 639 MobiDBLite consensus disorder prediction 491 509 - -
Accr5g02948 639 Gene3D Kinesin motor domain 102 479 IPR036961 -
Accr5g02948 639 MobiDBLite consensus disorder prediction 591 619 - -
Accr5g02948 639 SMART kinesin_4 105 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02948 639 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 61 434 - -
Accr5g02948 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 472 IPR027417 -
Accr5g02948 639 MobiDBLite consensus disorder prediction 485 550 - -
Accr5g02948 639 Coils Coil 443 484 - -
Accr5g02948 639 Coils Coil 66 86 - -
Accr5g02948 639 PRINTS Kinesin heavy chain signature 382 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02948 639 PRINTS Kinesin heavy chain signature 176 197 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02948 639 PRINTS Kinesin heavy chain signature 333 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02948 639 PRINTS Kinesin heavy chain signature 301 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02948 639 MobiDBLite consensus disorder prediction 516 544 - -
Accr5g02948 639 Pfam Kinesin motor domain 132 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02948 639 ProSiteProfiles Kinesin motor domain profile. 107 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02948 639 PANTHER KINESIN-LIKE PROTEIN KLP-3 70 590 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02948 Accr-Chr5 54930411 54933473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02948 79 430 Calmodulin-binding Proteins AT5G65930 40.223 6.47e-70 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02948 - - gmx:100785581 858.211