Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02943 ATGGGGTGCGTGATCAGTCGAGAAGTCTCATCTGAGATAACCTCAGAGGTGAAAGAGGAGAGGAATTTGAGCGCTGAATCGAATGGGAGGATAGATGAAAACTCCACGGGGACAGCCGAGGGGGAAGTGGTTGAGGATCAGAACGTTGGCAACCAAAAGGAAGAGAGAGATGGTGATGATGGGACCAACGTTCAGCAGCCCCGGAGCAGAAGGAGAAGGTCAAAGCCCAACCCAAGGCTTAGTAACCCTCCAAAGCATTTGCAGGGGGAGCAAGCAGCAGCTGGCTGGCCCCCCTGGCTTACGGCAGTGTGTGGAGAAGCACTCAGTGGGTGGATTCCGCGGAAGGCTGACTCATTTGAGAAAATTGACAAGATTGGGCAAGGGACGTATAGCAATGTGTACAAAGCTAAAGACATGTTGACTGGTAAAATTGTTGCATTGAAGAAGGTTCGATTTGACAATTTGGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTATTTTGCGAAGATTGGATCATATCAATGTTGTAAAGTTGGAAGGTTTAGTTACATCAAGAATGTCCTGTAGTTTGTATTTGGTGTTTAATTACATGGAGCATGATTTGGCTGGACTTGCGGCGAGCCCAGGAATCAAGTTCACTGAGCCTCAGGTCAAATGTTACATGCACCAACTATTATCTGGACTTGAGCACTGTCATAACCTTCAAGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATAGCTGACTTTGGACTGGCATCTTTCTTTGACCCTAACCGGAAGCTGATGATGACTAATCGTGTAGTTACACTTTGGTATCGACCTCCTGAGTTGCTTCTTGGTGCCACAGAATATGGTGTGGGAGTGGACCTTTGGAGTGCAGGTTGCATTTTGGGTGAGTTATTGGCAGGAAAGCCAATTATGCCTGGTCGCACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCCTCAGATGAATACTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCTCGAGAGCCTTACAAGAGAAGCATGCGAGAGACATTTAAAGATTTTCCACCTTCTGCACTTACACTTATGGATACCCTTCTTGCTCTTGATCCAGCAGAAAGGAAGACTGCATCAGATGCCCTAAGAAGTGAGTTCTTCACCACAGAACCTTATGCCTGTGATCCTTCTAGTCTTCCCAAATATCCGCCAAGCAAGGAAATGGATGCTAAACGCCGAGATGATGAAGCAAGGAGACAACGAGCTGCAGGCAAAGCTCAGGTTGATGGTGCAAAGAAACTCCGAACACGTAATCGAGCTAAACCTAATCCTGCCCCTGAAGCCAACGCTGAGCGTCAATCCAATATTGATAGAAGGCGTCTAATAACTCGTGCAAATGCAAAGAGCAAGAGTGAGAAGTTCCCGCCACCACATCAAGATGGACAACTTGGCTTTCCTTTAGGATCTTCACATCATATTGATCCAGATATCGTTCCTCCTGATGTCTCTTTTAGTTCAACCACATTTACCTATTCAAAAGAACCATTCCAAGCTTGGTCAGGGCCCATTGCTGCGCCCAAGCAGAAGAAACATGCGTCCGGGGATGCAGTTGATTTGTCCAAACAACGTAGAAGTGCCCTCAAGGATAAACGTTAA 1704 0.4583 MGCVISREVSSEITSEVKEERNLSAESNGRIDENSTGTAEGEVVEDQNVGNQKEERDGDDGTNVQQPRSRRRRSKPNPRLSNPPKHLQGEQAAAGWPPWLTAVCGEALSGWIPRKADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHINVVKLEGLVTSRMSCSLYLVFNYMEHDLAGLAASPGIKFTEPQVKCYMHQLLSGLEHCHNLQVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRKLMMTNRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRSMRETFKDFPPSALTLMDTLLALDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEARRQRAAGKAQVDGAKKLRTRNRAKPNPAPEANAERQSNIDRRRLITRANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDIVPPDVSFSSTTFTYSKEPFQAWSGPIAAPKQKKHASGDAVDLSKQRRSALKDKR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02943 567 MobiDBLite consensus disorder prediction 421 452 - -
Accr5g02943 567 SUPERFAMILY Protein kinase-like (PK-like) 113 410 IPR011009 -
Accr5g02943 567 MobiDBLite consensus disorder prediction 547 567 - -
Accr5g02943 567 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
Accr5g02943 567 CDD STKc_CDK9_like 119 403 - -
Accr5g02943 567 Gene3D Transferase(Phosphotransferase) domain 1 202 443 - -
Accr5g02943 567 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02943 567 MobiDBLite consensus disorder prediction 517 531 - -
Accr5g02943 567 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Accr5g02943 567 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Accr5g02943 567 MobiDBLite consensus disorder prediction 468 491 - -
Accr5g02943 567 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Accr5g02943 567 MobiDBLite consensus disorder prediction 1 92 - -
Accr5g02943 567 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02943 567 MobiDBLite consensus disorder prediction 409 567 - -
Accr5g02943 567 MobiDBLite consensus disorder prediction 47 67 - -
Accr5g02943 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Accr5g02943 567 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02943 567 MobiDBLite consensus disorder prediction 12 27 - -
Accr5g02943 567 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02943 Accr-Chr5 54853085 54856505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02943 111 443 Core Cell Cycle Gene Families AT5G10270 53.295 2.81e-124 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr5g02943 Pkinase 1.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02943 K08819 - gmx:100817289 923.694