Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02941 ATGGCTTTTGATTTAAGTTCCGTTTTTCCGAAATTGCAACTGCTAATGACTTCCGATCATGCTTCCGTGGTCTCCATGAACCTATTTGTGGCACTCCTGTGTGCTTGTATTGTCATTGGCCATCTTCTCGAAGAGAATCGATGGGTGAATGAGTCCATCACCGCCCTTTTGATTGGTCTTTGCACTGGCGTAGTCATTTTGCTGATAAGGCGTGGTCGAAGCTCGCATCTTCTTGTTTTCAGCGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTAAATTTCATCACTATTATGCTGTTTGGTGCTGTTGGTACATTAATATCTTGCGCCATCATTACTTTTGGTGTTTCACAAAGTTTCAAACAGTTGGGCATTGGTTCACTTGATATTGGGGATTATCTAGCAATTGGTGCAATATTTGCCGCAACGGATTCTGTGTGCACATTACAGGTGTTAAATCAAGACGAGACACCTTTACTCTACAGCCTAGTGTTTGGTGAGGGTGTCGTGAATGATGCTACGTCTGTTGTGCTTTTTAATGCAATCCAAAGCTTTGACCTCAACCAACTAGACTCTGGAATTGCTCTAAAATTGCTTGGAAACTTTCTGTACTTGTTTATTGCAAGCACATTGCTCGGTGTTTTGACTGGTCTTCTTAGTGCTTATATTATTAAAAAGCTATATATTGGCAGGCACTCCACGGATCGTGAAGTTGCTCTAATGATGCTGATGGCATACCTTTCCTACATGCTAGCCGAATTATGTTATCTGAGTGGTATCCTCACTGTATTCTTCTGTGGGATTGTAATGTCTCATTATACTTGGCATAACGTGACTGAGAGTTCCAGAGTCACTACGAAGCATGCTTTTGCAACCTTGTCGTTTGTTGCTGAGACATTTATCTTCCTTTATGTTGGTATAGATGCCCTGGACATTGATAAATGGAGGTTTGTAAGTGATAGCCCTGGAAAGTCAATAGCAGTGAGTTCAGTGTTGTTGGGTCTATTACTCGTTGGAAGAGCAGCTTTTGTTTTCCCCCTATCCTTCCTCTCCAACTTGGCTAAAAAGTCGCCAAGTGAGAAAATCAACTTCAGGCAGCAAGTGATCATATGGTGGGCTGGTCTGATGAGAGGTTCTGTTTCAATGGCACTCGCATATAATCAGTTCACCATGTCAGGCCATACTCAATTGCGATCCCATGCAATGATGATTACTAGCACAATCACAGTTGTGCTCTTCAGCACAGTGGTCTTTGGTTTAATGACTAAGCCACTCATAAGGTATTTGCTGCCTAATGTTAAACACATAAGCAGCGCGGTCACCACGGAATCAAACACTCCAAAATCTCATACCGTGCCACTTCTTGGGGCTTCCCAAGATTCCGAAGCTGATATTGATGGAAATTCACTTATTCGCCCAAGTAGCATTCGTTTATTACTCACCACTCCTACCCACACAGTTCATCGCTACTGGCGTAAGTTTGATAACGCAGTCATGCGCCCAGTTTTTGGAGGCAGGGGTTTTGTTCCTGTGGAGCCTGGCTCACCTACTGAACCAAACGGTCACCAGTGGCAATGA 1626 0.4293 MAFDLSSVFPKLQLLMTSDHASVVSMNLFVALLCACIVIGHLLEENRWVNESITALLIGLCTGVVILLIRRGRSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAVGTLISCAIITFGVSQSFKQLGIGSLDIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQLDSGIALKLLGNFLYLFIASTLLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAETFIFLYVGIDALDIDKWRFVSDSPGKSIAVSSVLLGLLLVGRAAFVFPLSFLSNLAKKSPSEKINFRQQVIIWWAGLMRGSVSMALAYNQFTMSGHTQLRSHAMMITSTITVVLFSTVVFGLMTKPLIRYLLPNVKHISSAVTTESNTPKSHTVPLLGASQDSEADIDGNSLIRPSSIRLLLTTPTHTVHRYWRKFDNAVMRPVFGGRGFVPVEPGSPTEPNGHQWQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02941 541 MobiDBLite consensus disorder prediction 457 472 - -
Accr5g02941 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr5g02941 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr5g02941 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr5g02941 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr5g02941 541 MobiDBLite consensus disorder prediction 457 476 - -
Accr5g02941 541 Gene3D - 146 197 - -
Accr5g02941 541 NCBIfam sodium/hydrogen exchanger 3 25 450 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr5g02941 541 PANTHER SODIUM/HYDROGEN EXCHANGER 18 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Accr5g02941 541 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02941 Accr-Chr5 54816708 54823165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02941 6 539 Antiporters AT3G05030 75.651 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02941 - - gmx:100816746 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02941 5 54816708 54823165 Accr5g02941 5 54816708 54823165 CCT
Accr5g02941 5 54816708 54823165 Accr5g02941 5 54816708 54823165 ECH